Protein–RNA interactions for Protein: Q99836

MYD88, Myeloid differentiation primary response protein MyD88, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88Q99836 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
MYD88Q99836 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
MYD88Q99836 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
MYD88Q99836 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
MYD88Q99836 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
MYD88Q99836 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
MYD88Q99836 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
MYD88Q99836 AC009831.1-201ENST00000580420 1582 ntBASIC31.35■■■□□ 2.61
MYD88Q99836 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.35■■■□□ 2.61
MYD88Q99836 AL033527.3-201ENST00000566366 1196 ntBASIC31.35■■■□□ 2.61
MYD88Q99836 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
MYD88Q99836 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
MYD88Q99836 WHAMMP3-201ENST00000611636 1609 ntBASIC31.35■■■□□ 2.61
MYD88Q99836 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
MYD88Q99836 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.34■■■□□ 2.61
MYD88Q99836 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
MYD88Q99836 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.34■■■□□ 2.61
MYD88Q99836 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
MYD88Q99836 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
MYD88Q99836 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
MYD88Q99836 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.33■■■□□ 2.61
MYD88Q99836 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
MYD88Q99836 AC133552.2-201ENST00000619106 1032 ntBASIC31.32■■■□□ 2.6
MYD88Q99836 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.32■■■□□ 2.6
MYD88Q99836 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
MYD88Q99836 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
MYD88Q99836 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.31■■■□□ 2.6
MYD88Q99836 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
MYD88Q99836 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
MYD88Q99836 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
MYD88Q99836 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
MYD88Q99836 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
MYD88Q99836 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
MYD88Q99836 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
MYD88Q99836 AL592293.1-201ENST00000502889 1188 ntBASIC31.3■■■□□ 2.6
MYD88Q99836 AC026202.3-201ENST00000600805 1127 ntBASIC31.3■■■□□ 2.6
MYD88Q99836 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
MYD88Q99836 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
MYD88Q99836 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
MYD88Q99836 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
MYD88Q99836 AL359504.2-201ENST00000605506 1601 ntBASIC31.28■■■□□ 2.6
MYD88Q99836 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
MYD88Q99836 AC004987.1-201ENST00000428627 508 ntBASIC31.28■■■□□ 2.6
MYD88Q99836 RP9P-202ENST00000450133 1212 ntBASIC31.28■■■□□ 2.6
MYD88Q99836 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
MYD88Q99836 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
MYD88Q99836 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
MYD88Q99836 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
MYD88Q99836 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
MYD88Q99836 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
MYD88Q99836 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.27■■■□□ 2.6
MYD88Q99836 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
MYD88Q99836 AC093536.1-201ENST00000569153 554 ntBASIC31.26■■■□□ 2.59
MYD88Q99836 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
MYD88Q99836 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.26■■■□□ 2.59
MYD88Q99836 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
MYD88Q99836 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
MYD88Q99836 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
MYD88Q99836 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
MYD88Q99836 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.25■■■□□ 2.59
MYD88Q99836 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
MYD88Q99836 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
MYD88Q99836 LINC01003-201ENST00000564834 1764 ntBASIC31.25■■■□□ 2.59
MYD88Q99836 ATP5G2P3-201ENST00000429083 425 ntBASIC31.24■■■□□ 2.59
MYD88Q99836 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
MYD88Q99836 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.24■■■□□ 2.59
MYD88Q99836 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.24■■■□□ 2.59
MYD88Q99836 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.24■■■□□ 2.59
MYD88Q99836 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
MYD88Q99836 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
MYD88Q99836 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
MYD88Q99836 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
MYD88Q99836 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.23■■■□□ 2.59
MYD88Q99836 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
MYD88Q99836 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
MYD88Q99836 AC129492.7-201ENST00000622992 756 ntBASIC31.22■■■□□ 2.59
MYD88Q99836 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
MYD88Q99836 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.21■■■□□ 2.59
MYD88Q99836 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
MYD88Q99836 TSPY13P-201ENST00000338964 914 ntBASIC31.21■■■□□ 2.59
MYD88Q99836 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
MYD88Q99836 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.2■■■□□ 2.59
MYD88Q99836 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
MYD88Q99836 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
MYD88Q99836 MIR3960-201ENST00000583311 91 ntBASIC31.2■■■□□ 2.59
MYD88Q99836 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.2■■■□□ 2.59
MYD88Q99836 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
MYD88Q99836 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
MYD88Q99836 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.19■■■□□ 2.58
MYD88Q99836 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
MYD88Q99836 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.18■■■□□ 2.58
MYD88Q99836 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.18■■■□□ 2.58
MYD88Q99836 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
MYD88Q99836 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.18■■■□□ 2.58
MYD88Q99836 RAP2CP1-202ENST00000605179 643 ntBASIC31.18■■■□□ 2.58
MYD88Q99836 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
MYD88Q99836 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
MYD88Q99836 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.18■■■□□ 2.58
MYD88Q99836 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.17■■■□□ 2.58
MYD88Q99836 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms