Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GAFA1Q96PS6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
GAFA1Q96PS6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GAFA1Q96PS6 AC126177.7-201ENST00000547904 679 ntBASIC20.68■□□□□ 0.9
GAFA1Q96PS6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GAFA1Q96PS6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GAFA1Q96PS6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.67■□□□□ 0.9
GAFA1Q96PS6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GAFA1Q96PS6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GAFA1Q96PS6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GAFA1Q96PS6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GAFA1Q96PS6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GAFA1Q96PS6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
GAFA1Q96PS6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GAFA1Q96PS6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GAFA1Q96PS6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GAFA1Q96PS6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
GAFA1Q96PS6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GAFA1Q96PS6 AL121749.1-202ENST00000609313 2153 ntBASIC20.66■□□□□ 0.9
GAFA1Q96PS6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GAFA1Q96PS6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GAFA1Q96PS6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GAFA1Q96PS6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.65■□□□□ 0.9
GAFA1Q96PS6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GAFA1Q96PS6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GAFA1Q96PS6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.65■□□□□ 0.9
GAFA1Q96PS6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.65■□□□□ 0.9
GAFA1Q96PS6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GAFA1Q96PS6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.64■□□□□ 0.9
GAFA1Q96PS6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GAFA1Q96PS6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GAFA1Q96PS6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.64■□□□□ 0.89
GAFA1Q96PS6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GAFA1Q96PS6 AC060814.1-201ENST00000554326 538 ntBASIC20.63■□□□□ 0.89
GAFA1Q96PS6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
GAFA1Q96PS6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GAFA1Q96PS6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GAFA1Q96PS6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GAFA1Q96PS6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GAFA1Q96PS6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GAFA1Q96PS6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GAFA1Q96PS6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.62■□□□□ 0.89
GAFA1Q96PS6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GAFA1Q96PS6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GAFA1Q96PS6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GAFA1Q96PS6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.61■□□□□ 0.89
GAFA1Q96PS6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.61■□□□□ 0.89
GAFA1Q96PS6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GAFA1Q96PS6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.6■□□□□ 0.89
GAFA1Q96PS6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GAFA1Q96PS6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GAFA1Q96PS6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
GAFA1Q96PS6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.6■□□□□ 0.89
GAFA1Q96PS6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GAFA1Q96PS6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GAFA1Q96PS6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GAFA1Q96PS6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.59■□□□□ 0.89
GAFA1Q96PS6 AC022413.1-201ENST00000624602 984 ntBASIC20.59■□□□□ 0.89
GAFA1Q96PS6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GAFA1Q96PS6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GAFA1Q96PS6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
GAFA1Q96PS6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GAFA1Q96PS6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.58■□□□□ 0.89
GAFA1Q96PS6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GAFA1Q96PS6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
GAFA1Q96PS6 AP004609.3-201ENST00000610705 1884 ntBASIC20.58■□□□□ 0.88
GAFA1Q96PS6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GAFA1Q96PS6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
GAFA1Q96PS6 AC142472.1-201ENST00000612013 1741 ntBASIC20.56■□□□□ 0.88
GAFA1Q96PS6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GAFA1Q96PS6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GAFA1Q96PS6 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.56■□□□□ 0.88
GAFA1Q96PS6 AL157400.5-201ENST00000507624 621 ntBASIC20.56■□□□□ 0.88
GAFA1Q96PS6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GAFA1Q96PS6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
GAFA1Q96PS6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.56■□□□□ 0.88
GAFA1Q96PS6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GAFA1Q96PS6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GAFA1Q96PS6 GPX1-201ENST00000419349 1106 ntBASIC20.55■□□□□ 0.88
GAFA1Q96PS6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GAFA1Q96PS6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAFA1Q96PS6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAFA1Q96PS6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAFA1Q96PS6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GAFA1Q96PS6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.54■□□□□ 0.88
GAFA1Q96PS6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAFA1Q96PS6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
GAFA1Q96PS6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GAFA1Q96PS6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.53■□□□□ 0.88
GAFA1Q96PS6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAFA1Q96PS6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GAFA1Q96PS6 AC092296.2-201ENST00000589470 999 ntBASIC20.53■□□□□ 0.88
GAFA1Q96PS6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAFA1Q96PS6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GAFA1Q96PS6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.52■□□□□ 0.88
GAFA1Q96PS6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GAFA1Q96PS6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GAFA1Q96PS6 AL359504.2-201ENST00000605506 1601 ntBASIC20.52■□□□□ 0.88
GAFA1Q96PS6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.51■□□□□ 0.87
GAFA1Q96PS6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms