Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.44■■□□□ 1.02
APOBEC3DQ96AK3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.44■■□□□ 1.02
APOBEC3DQ96AK3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
APOBEC3DQ96AK3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
APOBEC3DQ96AK3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
APOBEC3DQ96AK3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.43■■□□□ 1.02
APOBEC3DQ96AK3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.42■■□□□ 1.02
APOBEC3DQ96AK3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
APOBEC3DQ96AK3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APOBEC3DQ96AK3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
APOBEC3DQ96AK3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
APOBEC3DQ96AK3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APOBEC3DQ96AK3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
APOBEC3DQ96AK3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APOBEC3DQ96AK3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APOBEC3DQ96AK3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 AC126177.7-201ENST00000547904 679 ntBASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APOBEC3DQ96AK3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
APOBEC3DQ96AK3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
APOBEC3DQ96AK3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APOBEC3DQ96AK3 AP004609.3-201ENST00000610705 1884 ntBASIC21.39■■□□□ 1.01
APOBEC3DQ96AK3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
APOBEC3DQ96AK3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
APOBEC3DQ96AK3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
APOBEC3DQ96AK3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.38■■□□□ 1.01
APOBEC3DQ96AK3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
APOBEC3DQ96AK3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.38■■□□□ 1.01
APOBEC3DQ96AK3 AL359258.2-201ENST00000564063 1566 ntBASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APOBEC3DQ96AK3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
APOBEC3DQ96AK3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APOBEC3DQ96AK3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APOBEC3DQ96AK3 AC142472.1-201ENST00000612013 1741 ntBASIC21.36■■□□□ 1.01
APOBEC3DQ96AK3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APOBEC3DQ96AK3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
APOBEC3DQ96AK3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.36■■□□□ 1.01
APOBEC3DQ96AK3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
APOBEC3DQ96AK3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APOBEC3DQ96AK3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APOBEC3DQ96AK3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
APOBEC3DQ96AK3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.34■■□□□ 1.01
APOBEC3DQ96AK3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APOBEC3DQ96AK3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.34■■□□□ 1.01
APOBEC3DQ96AK3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
APOBEC3DQ96AK3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APOBEC3DQ96AK3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APOBEC3DQ96AK3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APOBEC3DQ96AK3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
APOBEC3DQ96AK3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.33■■□□□ 1.01
APOBEC3DQ96AK3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APOBEC3DQ96AK3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
APOBEC3DQ96AK3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.32■■□□□ 1
APOBEC3DQ96AK3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.32■■□□□ 1
APOBEC3DQ96AK3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.32■■□□□ 1
APOBEC3DQ96AK3 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.32■■□□□ 1
APOBEC3DQ96AK3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.32■■□□□ 1
APOBEC3DQ96AK3 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.32■■□□□ 1
APOBEC3DQ96AK3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APOBEC3DQ96AK3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APOBEC3DQ96AK3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.31■■□□□ 1
APOBEC3DQ96AK3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
APOBEC3DQ96AK3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.31■■□□□ 1
APOBEC3DQ96AK3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APOBEC3DQ96AK3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APOBEC3DQ96AK3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
APOBEC3DQ96AK3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.3■■□□□ 1
APOBEC3DQ96AK3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APOBEC3DQ96AK3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.29■■□□□ 1
APOBEC3DQ96AK3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.29■■□□□ 1
APOBEC3DQ96AK3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APOBEC3DQ96AK3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.29■■□□□ 1
APOBEC3DQ96AK3 MIR4449-201ENST00000578365 66 ntBASIC21.29■■□□□ 1
APOBEC3DQ96AK3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APOBEC3DQ96AK3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.28■■□□□ 1
APOBEC3DQ96AK3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APOBEC3DQ96AK3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
APOBEC3DQ96AK3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APOBEC3DQ96AK3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.28■■□□□ 1
APOBEC3DQ96AK3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.28■■□□□ 1
APOBEC3DQ96AK3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.27■■□□□ 1
APOBEC3DQ96AK3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.27■■□□□ 1
APOBEC3DQ96AK3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms