Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01006Q8NI28 SPCS2P3-201ENST00000500401 656 ntBASIC19.5■□□□□ 0.71
LINC01006Q8NI28 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LINC01006Q8NI28 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LINC01006Q8NI28 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01006Q8NI28 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.49■□□□□ 0.71
LINC01006Q8NI28 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.49■□□□□ 0.71
LINC01006Q8NI28 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01006Q8NI28 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01006Q8NI28 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01006Q8NI28 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01006Q8NI28 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01006Q8NI28 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.48■□□□□ 0.71
LINC01006Q8NI28 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LINC01006Q8NI28 AC074183.2-201ENST00000623112 922 ntBASIC19.48■□□□□ 0.71
LINC01006Q8NI28 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01006Q8NI28 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01006Q8NI28 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01006Q8NI28 AC010980.1-201ENST00000587192 1142 ntBASIC19.47■□□□□ 0.71
LINC01006Q8NI28 AL035685.1-201ENST00000636663 812 ntBASIC19.47■□□□□ 0.71
LINC01006Q8NI28 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01006Q8NI28 AL451085.2-201ENST00000605085 799 ntBASIC19.46■□□□□ 0.71
LINC01006Q8NI28 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01006Q8NI28 MIR6765-201ENST00000614092 87 ntBASIC19.46■□□□□ 0.71
LINC01006Q8NI28 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01006Q8NI28 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.46■□□□□ 0.71
LINC01006Q8NI28 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01006Q8NI28 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
LINC01006Q8NI28 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01006Q8NI28 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01006Q8NI28 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC01006Q8NI28 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC01006Q8NI28 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LINC01006Q8NI28 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01006Q8NI28 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01006Q8NI28 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC01006Q8NI28 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01006Q8NI28 AC139795.1-202ENST00000500444 432 ntBASIC19.44■□□□□ 0.7
LINC01006Q8NI28 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01006Q8NI28 AC018755.3-202ENST00000596210 929 ntBASIC19.44■□□□□ 0.7
LINC01006Q8NI28 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.44■□□□□ 0.7
LINC01006Q8NI28 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01006Q8NI28 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01006Q8NI28 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01006Q8NI28 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01006Q8NI28 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC01006Q8NI28 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01006Q8NI28 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01006Q8NI28 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01006Q8NI28 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC01006Q8NI28 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LINC01006Q8NI28 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC01006Q8NI28 KRT8P33-201ENST00000508125 1423 ntBASIC19.42■□□□□ 0.7
LINC01006Q8NI28 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01006Q8NI28 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 AL359504.2-201ENST00000605506 1601 ntBASIC19.41■□□□□ 0.7
LINC01006Q8NI28 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01006Q8NI28 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01006Q8NI28 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01006Q8NI28 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01006Q8NI28 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01006Q8NI28 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01006Q8NI28 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC01006Q8NI28 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01006Q8NI28 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.4■□□□□ 0.7
LINC01006Q8NI28 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01006Q8NI28 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
LINC01006Q8NI28 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.39■□□□□ 0.7
LINC01006Q8NI28 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.39■□□□□ 0.7
LINC01006Q8NI28 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC01006Q8NI28 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC01006Q8NI28 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01006Q8NI28 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.39■□□□□ 0.69
LINC01006Q8NI28 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01006Q8NI28 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC01006Q8NI28 YBX1P4-201ENST00000392794 808 ntBASIC19.38■□□□□ 0.69
LINC01006Q8NI28 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01006Q8NI28 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.38■□□□□ 0.69
LINC01006Q8NI28 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01006Q8NI28 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01006Q8NI28 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.37■□□□□ 0.69
LINC01006Q8NI28 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.37■□□□□ 0.69
LINC01006Q8NI28 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01006Q8NI28 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01006Q8NI28 ABCB10P1-201ENST00000614297 2181 ntBASIC19.36■□□□□ 0.69
LINC01006Q8NI28 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LINC01006Q8NI28 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01006Q8NI28 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01006Q8NI28 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01006Q8NI28 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01006Q8NI28 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms