Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.45■■□□□ 1.5
CPNE9Q8IYJ1 MIR7108-201ENST00000614319 87 ntBASIC24.45■■□□□ 1.5
CPNE9Q8IYJ1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CPNE9Q8IYJ1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.44■■□□□ 1.5
CPNE9Q8IYJ1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CPNE9Q8IYJ1 MIR219A2-201ENST00000608502 1504 ntBASIC24.44■■□□□ 1.5
CPNE9Q8IYJ1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPNE9Q8IYJ1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.43■■□□□ 1.5
CPNE9Q8IYJ1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CPNE9Q8IYJ1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CPNE9Q8IYJ1 AC148477.6-201ENST00000623746 465 ntBASIC24.43■■□□□ 1.5
CPNE9Q8IYJ1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPNE9Q8IYJ1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CPNE9Q8IYJ1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CPNE9Q8IYJ1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.42■■□□□ 1.5
CPNE9Q8IYJ1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.42■■□□□ 1.5
CPNE9Q8IYJ1 AC016575.1-201ENST00000607026 382 ntBASIC24.42■■□□□ 1.5
CPNE9Q8IYJ1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CPNE9Q8IYJ1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CPNE9Q8IYJ1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPNE9Q8IYJ1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.41■■□□□ 1.5
CPNE9Q8IYJ1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPNE9Q8IYJ1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.41■■□□□ 1.5
CPNE9Q8IYJ1 AP004609.3-201ENST00000610705 1884 ntBASIC24.41■■□□□ 1.5
CPNE9Q8IYJ1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
CPNE9Q8IYJ1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CPNE9Q8IYJ1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CPNE9Q8IYJ1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CPNE9Q8IYJ1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CPNE9Q8IYJ1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
CPNE9Q8IYJ1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.39■■□□□ 1.49
CPNE9Q8IYJ1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPNE9Q8IYJ1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CPNE9Q8IYJ1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPNE9Q8IYJ1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CPNE9Q8IYJ1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.38■■□□□ 1.49
CPNE9Q8IYJ1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.37■■□□□ 1.49
CPNE9Q8IYJ1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CPNE9Q8IYJ1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CPNE9Q8IYJ1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.37■■□□□ 1.49
CPNE9Q8IYJ1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.36■■□□□ 1.49
CPNE9Q8IYJ1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CPNE9Q8IYJ1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CPNE9Q8IYJ1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.35■■□□□ 1.49
CPNE9Q8IYJ1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPNE9Q8IYJ1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.34■■□□□ 1.49
CPNE9Q8IYJ1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPNE9Q8IYJ1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPNE9Q8IYJ1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CPNE9Q8IYJ1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPNE9Q8IYJ1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CPNE9Q8IYJ1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.33■■□□□ 1.49
CPNE9Q8IYJ1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CPNE9Q8IYJ1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.33■■□□□ 1.49
CPNE9Q8IYJ1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CPNE9Q8IYJ1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.33■■□□□ 1.48
CPNE9Q8IYJ1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPNE9Q8IYJ1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CPNE9Q8IYJ1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CPNE9Q8IYJ1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CPNE9Q8IYJ1 AC142472.1-201ENST00000612013 1741 ntBASIC24.32■■□□□ 1.48
CPNE9Q8IYJ1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CPNE9Q8IYJ1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CPNE9Q8IYJ1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.31■■□□□ 1.48
CPNE9Q8IYJ1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.31■■□□□ 1.48
CPNE9Q8IYJ1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.31■■□□□ 1.48
CPNE9Q8IYJ1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.31■■□□□ 1.48
CPNE9Q8IYJ1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
CPNE9Q8IYJ1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CPNE9Q8IYJ1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CPNE9Q8IYJ1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CPNE9Q8IYJ1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPNE9Q8IYJ1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CPNE9Q8IYJ1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPNE9Q8IYJ1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.29■■□□□ 1.48
CPNE9Q8IYJ1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.29■■□□□ 1.48
CPNE9Q8IYJ1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.29■■□□□ 1.48
CPNE9Q8IYJ1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CPNE9Q8IYJ1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CPNE9Q8IYJ1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.28■■□□□ 1.48
CPNE9Q8IYJ1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CPNE9Q8IYJ1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.28■■□□□ 1.48
CPNE9Q8IYJ1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPNE9Q8IYJ1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.27■■□□□ 1.48
CPNE9Q8IYJ1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPNE9Q8IYJ1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPNE9Q8IYJ1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPNE9Q8IYJ1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.27■■□□□ 1.48
CPNE9Q8IYJ1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CPNE9Q8IYJ1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms