Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.93■■□□□ 1.58
SRRM1Q8IYB3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SRRM1Q8IYB3 AP006261.1-201ENST00000584783 668 ntBASIC24.92■■□□□ 1.58
SRRM1Q8IYB3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.92■■□□□ 1.58
SRRM1Q8IYB3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
SRRM1Q8IYB3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SRRM1Q8IYB3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SRRM1Q8IYB3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.91■■□□□ 1.58
SRRM1Q8IYB3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SRRM1Q8IYB3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SRRM1Q8IYB3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
SRRM1Q8IYB3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.9■■□□□ 1.58
SRRM1Q8IYB3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SRRM1Q8IYB3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SRRM1Q8IYB3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
SRRM1Q8IYB3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
SRRM1Q8IYB3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SRRM1Q8IYB3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SRRM1Q8IYB3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SRRM1Q8IYB3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
SRRM1Q8IYB3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SRRM1Q8IYB3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
SRRM1Q8IYB3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SRRM1Q8IYB3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SRRM1Q8IYB3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SRRM1Q8IYB3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SRRM1Q8IYB3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SRRM1Q8IYB3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SRRM1Q8IYB3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.88■■□□□ 1.57
SRRM1Q8IYB3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.88■■□□□ 1.57
SRRM1Q8IYB3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SRRM1Q8IYB3 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.87■■□□□ 1.57
SRRM1Q8IYB3 LINC00273-201ENST00000539813 1452 ntBASIC24.87■■□□□ 1.57
SRRM1Q8IYB3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
SRRM1Q8IYB3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SRRM1Q8IYB3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.87■■□□□ 1.57
SRRM1Q8IYB3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.86■■□□□ 1.57
SRRM1Q8IYB3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
SRRM1Q8IYB3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.86■■□□□ 1.57
SRRM1Q8IYB3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SRRM1Q8IYB3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SRRM1Q8IYB3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SRRM1Q8IYB3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.85■■□□□ 1.57
SRRM1Q8IYB3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SRRM1Q8IYB3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SRRM1Q8IYB3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SRRM1Q8IYB3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SRRM1Q8IYB3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.84■■□□□ 1.57
SRRM1Q8IYB3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SRRM1Q8IYB3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SRRM1Q8IYB3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SRRM1Q8IYB3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.83■■□□□ 1.56
SRRM1Q8IYB3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.82■■□□□ 1.56
SRRM1Q8IYB3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SRRM1Q8IYB3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SRRM1Q8IYB3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SRRM1Q8IYB3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRRM1Q8IYB3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRRM1Q8IYB3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.81■■□□□ 1.56
SRRM1Q8IYB3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.81■■□□□ 1.56
SRRM1Q8IYB3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SRRM1Q8IYB3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.81■■□□□ 1.56
SRRM1Q8IYB3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SRRM1Q8IYB3 AC108673.1-201ENST00000510422 1159 ntBASIC24.8■■□□□ 1.56
SRRM1Q8IYB3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SRRM1Q8IYB3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SRRM1Q8IYB3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SRRM1Q8IYB3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SRRM1Q8IYB3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
SRRM1Q8IYB3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
SRRM1Q8IYB3 AC142472.1-201ENST00000612013 1741 ntBASIC24.78■■□□□ 1.56
SRRM1Q8IYB3 MIR6090-201ENST00000622481 60 ntBASIC24.78■■□□□ 1.56
SRRM1Q8IYB3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SRRM1Q8IYB3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SRRM1Q8IYB3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SRRM1Q8IYB3 AC005559.1-201ENST00000589661 871 ntBASIC24.77■■□□□ 1.56
SRRM1Q8IYB3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
SRRM1Q8IYB3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
SRRM1Q8IYB3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SRRM1Q8IYB3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.75■■□□□ 1.55
SRRM1Q8IYB3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.75■■□□□ 1.55
SRRM1Q8IYB3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SRRM1Q8IYB3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.75■■□□□ 1.55
SRRM1Q8IYB3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.75■■□□□ 1.55
SRRM1Q8IYB3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
SRRM1Q8IYB3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SRRM1Q8IYB3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
SRRM1Q8IYB3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SRRM1Q8IYB3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
SRRM1Q8IYB3 ERN1-208ENST00000606895 2068 ntBASIC24.74■■□□□ 1.55
SRRM1Q8IYB3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SRRM1Q8IYB3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SRRM1Q8IYB3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SRRM1Q8IYB3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SRRM1Q8IYB3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.73■■□□□ 1.55
SRRM1Q8IYB3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SRRM1Q8IYB3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.72■■□□□ 1.55
SRRM1Q8IYB3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SRRM1Q8IYB3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SRRM1Q8IYB3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms