Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
DDX53Q86TM3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX53Q86TM3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX53Q86TM3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX53Q86TM3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.52■■□□□ 1.84
DDX53Q86TM3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.52■■□□□ 1.84
DDX53Q86TM3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
DDX53Q86TM3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX53Q86TM3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.51■■□□□ 1.83
DDX53Q86TM3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.51■■□□□ 1.83
DDX53Q86TM3 SPCS2P3-201ENST00000500401 656 ntBASIC26.51■■□□□ 1.83
DDX53Q86TM3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.51■■□□□ 1.83
DDX53Q86TM3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX53Q86TM3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX53Q86TM3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX53Q86TM3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX53Q86TM3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX53Q86TM3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.5■■□□□ 1.83
DDX53Q86TM3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.5■■□□□ 1.83
DDX53Q86TM3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
DDX53Q86TM3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.49■■□□□ 1.83
DDX53Q86TM3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX53Q86TM3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX53Q86TM3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
DDX53Q86TM3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX53Q86TM3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.48■■□□□ 1.83
DDX53Q86TM3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
DDX53Q86TM3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX53Q86TM3 BHLHE23-202ENST00000612929 1109 ntBASIC26.47■■□□□ 1.83
DDX53Q86TM3 AC074183.2-201ENST00000623112 922 ntBASIC26.47■■□□□ 1.83
DDX53Q86TM3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX53Q86TM3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
DDX53Q86TM3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
DDX53Q86TM3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX53Q86TM3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX53Q86TM3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX53Q86TM3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX53Q86TM3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.45■■□□□ 1.82
DDX53Q86TM3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.45■■□□□ 1.82
DDX53Q86TM3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX53Q86TM3 MIR6765-201ENST00000614092 87 ntBASIC26.44■■□□□ 1.82
DDX53Q86TM3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.44■■□□□ 1.82
DDX53Q86TM3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX53Q86TM3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.43■■□□□ 1.82
DDX53Q86TM3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX53Q86TM3 AC010980.1-201ENST00000587192 1142 ntBASIC26.42■■□□□ 1.82
DDX53Q86TM3 AL451085.2-201ENST00000605085 799 ntBASIC26.42■■□□□ 1.82
DDX53Q86TM3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
DDX53Q86TM3 AL035685.1-201ENST00000636663 812 ntBASIC26.42■■□□□ 1.82
DDX53Q86TM3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX53Q86TM3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX53Q86TM3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX53Q86TM3 AL359504.2-201ENST00000605506 1601 ntBASIC26.4■■□□□ 1.82
DDX53Q86TM3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
DDX53Q86TM3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.4■■□□□ 1.82
DDX53Q86TM3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX53Q86TM3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
DDX53Q86TM3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.39■■□□□ 1.82
DDX53Q86TM3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
DDX53Q86TM3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
DDX53Q86TM3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX53Q86TM3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX53Q86TM3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX53Q86TM3 AC018755.3-202ENST00000596210 929 ntBASIC26.39■■□□□ 1.82
DDX53Q86TM3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
DDX53Q86TM3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
DDX53Q86TM3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX53Q86TM3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.38■■□□□ 1.81
DDX53Q86TM3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX53Q86TM3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.38■■□□□ 1.81
DDX53Q86TM3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.38■■□□□ 1.81
DDX53Q86TM3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX53Q86TM3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DDX53Q86TM3 AC139795.1-202ENST00000500444 432 ntBASIC26.38■■□□□ 1.81
DDX53Q86TM3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.38■■□□□ 1.81
DDX53Q86TM3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX53Q86TM3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX53Q86TM3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.37■■□□□ 1.81
DDX53Q86TM3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.37■■□□□ 1.81
DDX53Q86TM3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.37■■□□□ 1.81
DDX53Q86TM3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
DDX53Q86TM3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.37■■□□□ 1.81
DDX53Q86TM3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX53Q86TM3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.36■■□□□ 1.81
DDX53Q86TM3 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.36■■□□□ 1.81
DDX53Q86TM3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.36■■□□□ 1.81
DDX53Q86TM3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX53Q86TM3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.35■■□□□ 1.81
DDX53Q86TM3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.35■■□□□ 1.81
DDX53Q86TM3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX53Q86TM3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX53Q86TM3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX53Q86TM3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX53Q86TM3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX53Q86TM3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX53Q86TM3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.34■■□□□ 1.81
DDX53Q86TM3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX53Q86TM3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX53Q86TM3 KRT8P33-201ENST00000508125 1423 ntBASIC26.33■■□□□ 1.81
DDX53Q86TM3 WHAMMP3-201ENST00000611636 1609 ntBASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms