Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAI1Q7Z5J4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RAI1Q7Z5J4 AC093536.1-201ENST00000569153 554 ntBASIC21.38■■□□□ 1.01
RAI1Q7Z5J4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAI1Q7Z5J4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 RAP2CP1-202ENST00000605179 643 ntBASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAI1Q7Z5J4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RAI1Q7Z5J4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.35■■□□□ 1.01
RAI1Q7Z5J4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 DUX4L9-201ENST00000449051 1259 ntBASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 SMPD5-203ENST00000639008 1464 ntBASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RAI1Q7Z5J4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RAI1Q7Z5J4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
RAI1Q7Z5J4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI1Q7Z5J4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI1Q7Z5J4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RAI1Q7Z5J4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.32■■□□□ 1
RAI1Q7Z5J4 AL451085.2-201ENST00000605085 799 ntBASIC21.32■■□□□ 1
RAI1Q7Z5J4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.32■■□□□ 1
RAI1Q7Z5J4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI1Q7Z5J4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.31■■□□□ 1
RAI1Q7Z5J4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.31■■□□□ 1
RAI1Q7Z5J4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAI1Q7Z5J4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAI1Q7Z5J4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAI1Q7Z5J4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAI1Q7Z5J4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAI1Q7Z5J4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAI1Q7Z5J4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAI1Q7Z5J4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RAI1Q7Z5J4 SPCS2P3-201ENST00000500401 656 ntBASIC21.3■■□□□ 1
RAI1Q7Z5J4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.3■■□□□ 1
RAI1Q7Z5J4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RAI1Q7Z5J4 AL359258.2-201ENST00000564063 1566 ntBASIC21.3■■□□□ 1
RAI1Q7Z5J4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAI1Q7Z5J4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.29■■□□□ 1
RAI1Q7Z5J4 AP002414.2-202ENST00000590929 1450 ntBASIC21.29■■□□□ 1
RAI1Q7Z5J4 AC026202.3-201ENST00000600805 1127 ntBASIC21.29■■□□□ 1
RAI1Q7Z5J4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.29■■□□□ 1
RAI1Q7Z5J4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.28■■□□□ 1
RAI1Q7Z5J4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.28■■□□□ 1
RAI1Q7Z5J4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
RAI1Q7Z5J4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAI1Q7Z5J4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RAI1Q7Z5J4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAI1Q7Z5J4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAI1Q7Z5J4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RAI1Q7Z5J4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAI1Q7Z5J4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAI1Q7Z5J4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI1Q7Z5J4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 RP9P-202ENST00000450133 1212 ntBASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms