Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.48■■□□□ 1.83
LIMS2Q7Z4I7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.48■■□□□ 1.83
LIMS2Q7Z4I7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.48■■□□□ 1.83
LIMS2Q7Z4I7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.48■■□□□ 1.83
LIMS2Q7Z4I7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LIMS2Q7Z4I7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.47■■□□□ 1.83
LIMS2Q7Z4I7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LIMS2Q7Z4I7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.47■■□□□ 1.83
LIMS2Q7Z4I7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LIMS2Q7Z4I7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.47■■□□□ 1.83
LIMS2Q7Z4I7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
LIMS2Q7Z4I7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
LIMS2Q7Z4I7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
LIMS2Q7Z4I7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LIMS2Q7Z4I7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.46■■□□□ 1.83
LIMS2Q7Z4I7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LIMS2Q7Z4I7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LIMS2Q7Z4I7 AC025884.2-201ENST00000553429 711 ntBASIC26.45■■□□□ 1.82
LIMS2Q7Z4I7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
LIMS2Q7Z4I7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LIMS2Q7Z4I7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LIMS2Q7Z4I7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LIMS2Q7Z4I7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LIMS2Q7Z4I7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LIMS2Q7Z4I7 AL449106.1-201ENST00000608517 1980 ntBASIC26.42■■□□□ 1.82
LIMS2Q7Z4I7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
LIMS2Q7Z4I7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.41■■□□□ 1.82
LIMS2Q7Z4I7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.41■■□□□ 1.82
LIMS2Q7Z4I7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.41■■□□□ 1.82
LIMS2Q7Z4I7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LIMS2Q7Z4I7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
LIMS2Q7Z4I7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.4■■□□□ 1.82
LIMS2Q7Z4I7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
LIMS2Q7Z4I7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
LIMS2Q7Z4I7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.39■■□□□ 1.82
LIMS2Q7Z4I7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LIMS2Q7Z4I7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LIMS2Q7Z4I7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
LIMS2Q7Z4I7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
LIMS2Q7Z4I7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.39■■□□□ 1.81
LIMS2Q7Z4I7 ABHD17AP5-201ENST00000580133 923 ntBASIC26.38■■□□□ 1.81
LIMS2Q7Z4I7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LIMS2Q7Z4I7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LIMS2Q7Z4I7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LIMS2Q7Z4I7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
LIMS2Q7Z4I7 SMPD5-203ENST00000639008 1464 ntBASIC26.37■■□□□ 1.81
LIMS2Q7Z4I7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LIMS2Q7Z4I7 AL359504.2-201ENST00000605506 1601 ntBASIC26.36■■□□□ 1.81
LIMS2Q7Z4I7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LIMS2Q7Z4I7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.36■■□□□ 1.81
LIMS2Q7Z4I7 AC007029.1-201ENST00000604183 313 ntBASIC26.35■■□□□ 1.81
LIMS2Q7Z4I7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LIMS2Q7Z4I7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
LIMS2Q7Z4I7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LIMS2Q7Z4I7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.34■■□□□ 1.81
LIMS2Q7Z4I7 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.34■■□□□ 1.81
LIMS2Q7Z4I7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.34■■□□□ 1.81
LIMS2Q7Z4I7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.33■■□□□ 1.81
LIMS2Q7Z4I7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.33■■□□□ 1.81
LIMS2Q7Z4I7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
LIMS2Q7Z4I7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LIMS2Q7Z4I7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LIMS2Q7Z4I7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.32■■□□□ 1.8
LIMS2Q7Z4I7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LIMS2Q7Z4I7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
LIMS2Q7Z4I7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.31■■□□□ 1.8
LIMS2Q7Z4I7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
LIMS2Q7Z4I7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
LIMS2Q7Z4I7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LIMS2Q7Z4I7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LIMS2Q7Z4I7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.3■■□□□ 1.8
LIMS2Q7Z4I7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
LIMS2Q7Z4I7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
LIMS2Q7Z4I7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
LIMS2Q7Z4I7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.29■■□□□ 1.8
LIMS2Q7Z4I7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LIMS2Q7Z4I7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LIMS2Q7Z4I7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
LIMS2Q7Z4I7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.28■■□□□ 1.8
LIMS2Q7Z4I7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LIMS2Q7Z4I7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
LIMS2Q7Z4I7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.27■■□□□ 1.8
LIMS2Q7Z4I7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LIMS2Q7Z4I7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LIMS2Q7Z4I7 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.27■■□□□ 1.8
LIMS2Q7Z4I7 U85056.1-201ENST00000616429 682 ntBASIC26.27■■□□□ 1.8
LIMS2Q7Z4I7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LIMS2Q7Z4I7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
LIMS2Q7Z4I7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
LIMS2Q7Z4I7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LIMS2Q7Z4I7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LIMS2Q7Z4I7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LIMS2Q7Z4I7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LIMS2Q7Z4I7 NTF6A-201ENST00000591175 560 ntBASIC26.25■■□□□ 1.79
LIMS2Q7Z4I7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LIMS2Q7Z4I7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.24■■□□□ 1.79
LIMS2Q7Z4I7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LIMS2Q7Z4I7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
LIMS2Q7Z4I7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LIMS2Q7Z4I7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms