Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.77■■□□□ 1.72
TTC39BQ5VTQ0 GPX1-201ENST00000419349 1106 ntBASIC25.77■■□□□ 1.72
TTC39BQ5VTQ0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.77■■□□□ 1.72
TTC39BQ5VTQ0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.77■■□□□ 1.72
TTC39BQ5VTQ0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
TTC39BQ5VTQ0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
TTC39BQ5VTQ0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.76■■□□□ 1.71
TTC39BQ5VTQ0 AC022413.1-201ENST00000624602 984 ntBASIC25.76■■□□□ 1.71
TTC39BQ5VTQ0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TTC39BQ5VTQ0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TTC39BQ5VTQ0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TTC39BQ5VTQ0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.75■■□□□ 1.71
TTC39BQ5VTQ0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TTC39BQ5VTQ0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.75■■□□□ 1.71
TTC39BQ5VTQ0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TTC39BQ5VTQ0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.74■■□□□ 1.71
TTC39BQ5VTQ0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.74■■□□□ 1.71
TTC39BQ5VTQ0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TTC39BQ5VTQ0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
TTC39BQ5VTQ0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TTC39BQ5VTQ0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.73■■□□□ 1.71
TTC39BQ5VTQ0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TTC39BQ5VTQ0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.73■■□□□ 1.71
TTC39BQ5VTQ0 AC060814.1-201ENST00000554326 538 ntBASIC25.73■■□□□ 1.71
TTC39BQ5VTQ0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
TTC39BQ5VTQ0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.73■■□□□ 1.71
TTC39BQ5VTQ0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TTC39BQ5VTQ0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TTC39BQ5VTQ0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.72■■□□□ 1.71
TTC39BQ5VTQ0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.72■■□□□ 1.71
TTC39BQ5VTQ0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.72■■□□□ 1.71
TTC39BQ5VTQ0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.72■■□□□ 1.71
TTC39BQ5VTQ0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TTC39BQ5VTQ0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.72■■□□□ 1.71
TTC39BQ5VTQ0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.71■■□□□ 1.71
TTC39BQ5VTQ0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
TTC39BQ5VTQ0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
TTC39BQ5VTQ0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
TTC39BQ5VTQ0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.7■■□□□ 1.7
TTC39BQ5VTQ0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TTC39BQ5VTQ0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TTC39BQ5VTQ0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TTC39BQ5VTQ0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.69■■□□□ 1.7
TTC39BQ5VTQ0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.69■■□□□ 1.7
TTC39BQ5VTQ0 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.69■■□□□ 1.7
TTC39BQ5VTQ0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TTC39BQ5VTQ0 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.69■■□□□ 1.7
TTC39BQ5VTQ0 LINC01003-201ENST00000564834 1764 ntBASIC25.69■■□□□ 1.7
TTC39BQ5VTQ0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TTC39BQ5VTQ0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
TTC39BQ5VTQ0 RNF126P1-201ENST00000567452 1320 ntBASIC25.67■■□□□ 1.7
TTC39BQ5VTQ0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
TTC39BQ5VTQ0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TTC39BQ5VTQ0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
TTC39BQ5VTQ0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TTC39BQ5VTQ0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
TTC39BQ5VTQ0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TTC39BQ5VTQ0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.66■■□□□ 1.7
TTC39BQ5VTQ0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TTC39BQ5VTQ0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.65■■□□□ 1.7
TTC39BQ5VTQ0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TTC39BQ5VTQ0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TTC39BQ5VTQ0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39BQ5VTQ0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39BQ5VTQ0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39BQ5VTQ0 AL359258.2-201ENST00000564063 1566 ntBASIC25.64■■□□□ 1.69
TTC39BQ5VTQ0 AC092296.2-201ENST00000589470 999 ntBASIC25.63■■□□□ 1.69
TTC39BQ5VTQ0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC39BQ5VTQ0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC39BQ5VTQ0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC39BQ5VTQ0 RARRES2P2-201ENST00000394842 485 ntBASIC25.61■■□□□ 1.69
TTC39BQ5VTQ0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TTC39BQ5VTQ0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC39BQ5VTQ0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TTC39BQ5VTQ0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.61■■□□□ 1.69
TTC39BQ5VTQ0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
TTC39BQ5VTQ0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39BQ5VTQ0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39BQ5VTQ0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39BQ5VTQ0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39BQ5VTQ0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39BQ5VTQ0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.58■■□□□ 1.68
TTC39BQ5VTQ0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.57■■□□□ 1.68
TTC39BQ5VTQ0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39BQ5VTQ0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39BQ5VTQ0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.57■■□□□ 1.68
TTC39BQ5VTQ0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
TTC39BQ5VTQ0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39BQ5VTQ0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39BQ5VTQ0 WHAMMP3-201ENST00000611636 1609 ntBASIC25.56■■□□□ 1.68
TTC39BQ5VTQ0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
TTC39BQ5VTQ0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.56■■□□□ 1.68
TTC39BQ5VTQ0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39BQ5VTQ0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39BQ5VTQ0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39BQ5VTQ0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39BQ5VTQ0 AL157400.5-201ENST00000507624 621 ntBASIC25.55■■□□□ 1.68
TTC39BQ5VTQ0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39BQ5VTQ0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39BQ5VTQ0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms