Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.67■■■□□ 2.02
TRIM60Q495X7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TRIM60Q495X7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TRIM60Q495X7 MIR3960-201ENST00000583311 91 ntBASIC27.67■■■□□ 2.02
TRIM60Q495X7 AC018755.3-202ENST00000596210 929 ntBASIC27.67■■■□□ 2.02
TRIM60Q495X7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.67■■■□□ 2.02
TRIM60Q495X7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.67■■■□□ 2.02
TRIM60Q495X7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TRIM60Q495X7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
TRIM60Q495X7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
TRIM60Q495X7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.66■■■□□ 2.02
TRIM60Q495X7 MIR4508-201ENST00000584178 70 ntBASIC27.66■■■□□ 2.02
TRIM60Q495X7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.66■■■□□ 2.02
TRIM60Q495X7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.66■■■□□ 2.02
TRIM60Q495X7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TRIM60Q495X7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TRIM60Q495X7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.65■■■□□ 2.02
TRIM60Q495X7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM60Q495X7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.64■■■□□ 2.02
TRIM60Q495X7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.63■■■□□ 2.01
TRIM60Q495X7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.63■■■□□ 2.01
TRIM60Q495X7 AL356441.2-201ENST00000443009 864 ntBASIC27.63■■■□□ 2.01
TRIM60Q495X7 AP004833.2-201ENST00000532228 1454 ntBASIC27.63■■■□□ 2.01
TRIM60Q495X7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM60Q495X7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM60Q495X7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.62■■■□□ 2.01
TRIM60Q495X7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM60Q495X7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
TRIM60Q495X7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.61■■■□□ 2.01
TRIM60Q495X7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TRIM60Q495X7 AC103724.3-201ENST00000564481 992 ntBASIC27.61■■■□□ 2.01
TRIM60Q495X7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
TRIM60Q495X7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.61■■■□□ 2.01
TRIM60Q495X7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.61■■■□□ 2.01
TRIM60Q495X7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.61■■■□□ 2.01
TRIM60Q495X7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TRIM60Q495X7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.6■■■□□ 2.01
TRIM60Q495X7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
TRIM60Q495X7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TRIM60Q495X7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.59■■■□□ 2.01
TRIM60Q495X7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
TRIM60Q495X7 AL031848.2-201ENST00000607670 837 ntBASIC27.59■■■□□ 2.01
TRIM60Q495X7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
TRIM60Q495X7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TRIM60Q495X7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.58■■■□□ 2.01
TRIM60Q495X7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TRIM60Q495X7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
TRIM60Q495X7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TRIM60Q495X7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
TRIM60Q495X7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.57■■■□□ 2
TRIM60Q495X7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TRIM60Q495X7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.57■■■□□ 2
TRIM60Q495X7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TRIM60Q495X7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.57■■■□□ 2
TRIM60Q495X7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.56■■■□□ 2
TRIM60Q495X7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.56■■■□□ 2
TRIM60Q495X7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
TRIM60Q495X7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TRIM60Q495X7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
TRIM60Q495X7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.55■■■□□ 2
TRIM60Q495X7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TRIM60Q495X7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TRIM60Q495X7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.54■■■□□ 2
TRIM60Q495X7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
TRIM60Q495X7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
TRIM60Q495X7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
TRIM60Q495X7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.53■■■□□ 2
TRIM60Q495X7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.53■■■□□ 2
TRIM60Q495X7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
TRIM60Q495X7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.52■■■□□ 2
TRIM60Q495X7 MIR935-201ENST00000401179 91 ntBASIC27.52■■■□□ 2
TRIM60Q495X7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.51■■□□□ 1.99
TRIM60Q495X7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TRIM60Q495X7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TRIM60Q495X7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TRIM60Q495X7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.51■■□□□ 1.99
TRIM60Q495X7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.5■■□□□ 1.99
TRIM60Q495X7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
TRIM60Q495X7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
TRIM60Q495X7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TRIM60Q495X7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.49■■□□□ 1.99
TRIM60Q495X7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.49■■□□□ 1.99
TRIM60Q495X7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.49■■□□□ 1.99
TRIM60Q495X7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.49■■□□□ 1.99
TRIM60Q495X7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
TRIM60Q495X7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
TRIM60Q495X7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC27.47■■□□□ 1.99
TRIM60Q495X7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
TRIM60Q495X7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.47■■□□□ 1.99
TRIM60Q495X7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.47■■□□□ 1.99
TRIM60Q495X7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TRIM60Q495X7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
TRIM60Q495X7 AC239859.2-201ENST00000444165 318 ntBASIC27.46■■□□□ 1.99
TRIM60Q495X7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.46■■□□□ 1.99
TRIM60Q495X7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TRIM60Q495X7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TRIM60Q495X7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TRIM60Q495X7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.45■■□□□ 1.98
TRIM60Q495X7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
TRIM60Q495X7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.44■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms