Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
COL15A1P39059 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL15A1P39059 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL15A1P39059 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL15A1P39059 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL15A1P39059 SPCS2P3-201ENST00000500401 656 ntBASIC31.85■■■□□ 2.69
COL15A1P39059 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
COL15A1P39059 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.84■■■□□ 2.69
COL15A1P39059 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
COL15A1P39059 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
COL15A1P39059 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
COL15A1P39059 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL15A1P39059 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.82■■■□□ 2.69
COL15A1P39059 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.82■■■□□ 2.69
COL15A1P39059 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
COL15A1P39059 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
COL15A1P39059 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.82■■■□□ 2.68
COL15A1P39059 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
COL15A1P39059 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.81■■■□□ 2.68
COL15A1P39059 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.81■■■□□ 2.68
COL15A1P39059 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
COL15A1P39059 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.81■■■□□ 2.68
COL15A1P39059 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
COL15A1P39059 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
COL15A1P39059 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.8■■■□□ 2.68
COL15A1P39059 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.8■■■□□ 2.68
COL15A1P39059 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.8■■■□□ 2.68
COL15A1P39059 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.8■■■□□ 2.68
COL15A1P39059 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.8■■■□□ 2.68
COL15A1P39059 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL15A1P39059 ABCB10P3-201ENST00000561950 2166 ntBASIC31.79■■■□□ 2.68
COL15A1P39059 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
COL15A1P39059 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
COL15A1P39059 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
COL15A1P39059 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
COL15A1P39059 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.78■■■□□ 2.68
COL15A1P39059 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL15A1P39059 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL15A1P39059 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
COL15A1P39059 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.77■■■□□ 2.68
COL15A1P39059 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.77■■■□□ 2.68
COL15A1P39059 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
COL15A1P39059 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.76■■■□□ 2.67
COL15A1P39059 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.76■■■□□ 2.67
COL15A1P39059 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.76■■■□□ 2.67
COL15A1P39059 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL15A1P39059 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.75■■■□□ 2.67
COL15A1P39059 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.75■■■□□ 2.67
COL15A1P39059 AC010980.1-201ENST00000587192 1142 ntBASIC31.75■■■□□ 2.67
COL15A1P39059 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
COL15A1P39059 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
COL15A1P39059 MIR3960-201ENST00000583311 91 ntBASIC31.73■■■□□ 2.67
COL15A1P39059 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.73■■■□□ 2.67
COL15A1P39059 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COL15A1P39059 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL15A1P39059 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL15A1P39059 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL15A1P39059 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL15A1P39059 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
COL15A1P39059 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
COL15A1P39059 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
COL15A1P39059 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.71■■■□□ 2.67
COL15A1P39059 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.69■■■□□ 2.66
COL15A1P39059 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.69■■■□□ 2.66
COL15A1P39059 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL15A1P39059 KRT8P33-201ENST00000508125 1423 ntBASIC31.69■■■□□ 2.66
COL15A1P39059 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.69■■■□□ 2.66
COL15A1P39059 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.68■■■□□ 2.66
COL15A1P39059 AP002414.2-202ENST00000590929 1450 ntBASIC31.68■■■□□ 2.66
COL15A1P39059 BHLHE23-202ENST00000612929 1109 ntBASIC31.68■■■□□ 2.66
COL15A1P39059 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COL15A1P39059 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
COL15A1P39059 MIR6765-201ENST00000614092 87 ntBASIC31.68■■■□□ 2.66
COL15A1P39059 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
COL15A1P39059 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.67■■■□□ 2.66
COL15A1P39059 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
COL15A1P39059 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
COL15A1P39059 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.67■■■□□ 2.66
COL15A1P39059 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
COL15A1P39059 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
COL15A1P39059 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
COL15A1P39059 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.66■■■□□ 2.66
COL15A1P39059 AC074183.2-201ENST00000623112 922 ntBASIC31.66■■■□□ 2.66
COL15A1P39059 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
COL15A1P39059 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.64■■■□□ 2.66
COL15A1P39059 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
COL15A1P39059 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
COL15A1P39059 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
COL15A1P39059 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.64■■■□□ 2.66
COL15A1P39059 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
COL15A1P39059 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL15A1P39059 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL15A1P39059 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL15A1P39059 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL15A1P39059 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.63■■■□□ 2.65
COL15A1P39059 AC139795.1-202ENST00000500444 432 ntBASIC31.63■■■□□ 2.65
COL15A1P39059 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.63■■■□□ 2.65
COL15A1P39059 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COL15A1P39059 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COL15A1P39059 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms