Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
PTP4A3O75365 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.25■■□□□ 1.15
PTP4A3O75365 LINC01971-201ENST00000617888 1048 ntBASIC22.25■■□□□ 1.15
PTP4A3O75365 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTP4A3O75365 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTP4A3O75365 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTP4A3O75365 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.25■■□□□ 1.15
PTP4A3O75365 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.25■■□□□ 1.15
PTP4A3O75365 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.25■■□□□ 1.15
PTP4A3O75365 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.25■■□□□ 1.15
PTP4A3O75365 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTP4A3O75365 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTP4A3O75365 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTP4A3O75365 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTP4A3O75365 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PTP4A3O75365 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.24■■□□□ 1.15
PTP4A3O75365 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTP4A3O75365 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.23■■□□□ 1.15
PTP4A3O75365 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTP4A3O75365 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTP4A3O75365 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTP4A3O75365 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.23■■□□□ 1.15
PTP4A3O75365 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PTP4A3O75365 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PTP4A3O75365 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTP4A3O75365 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTP4A3O75365 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTP4A3O75365 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTP4A3O75365 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTP4A3O75365 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PTP4A3O75365 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PTP4A3O75365 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTP4A3O75365 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTP4A3O75365 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
PTP4A3O75365 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.21■■□□□ 1.15
PTP4A3O75365 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.21■■□□□ 1.15
PTP4A3O75365 DUX4L13-201ENST00000554103 1267 ntBASIC22.21■■□□□ 1.15
PTP4A3O75365 DUX4L15-201ENST00000611059 1267 ntBASIC22.21■■□□□ 1.15
PTP4A3O75365 DUX4L23-201ENST00000615195 1269 ntBASIC22.21■■□□□ 1.15
PTP4A3O75365 DUX4L24-201ENST00000617576 1269 ntBASIC22.21■■□□□ 1.15
PTP4A3O75365 DUX4L22-201ENST00000618238 1269 ntBASIC22.21■■□□□ 1.15
PTP4A3O75365 DUX4L20-201ENST00000619712 1269 ntBASIC22.21■■□□□ 1.15
PTP4A3O75365 DUX4L21-201ENST00000622058 1269 ntBASIC22.21■■□□□ 1.15
PTP4A3O75365 DUX4L10-201ENST00000622460 1267 ntBASIC22.21■■□□□ 1.15
PTP4A3O75365 DUX4L25-201ENST00000624915 1269 ntBASIC22.21■■□□□ 1.15
PTP4A3O75365 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTP4A3O75365 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTP4A3O75365 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PTP4A3O75365 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PTP4A3O75365 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PTP4A3O75365 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PTP4A3O75365 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTP4A3O75365 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTP4A3O75365 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTP4A3O75365 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTP4A3O75365 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTP4A3O75365 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.2■■□□□ 1.14
PTP4A3O75365 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTP4A3O75365 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.2■■□□□ 1.14
PTP4A3O75365 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTP4A3O75365 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTP4A3O75365 AC020928.2-201ENST00000588717 2197 ntBASIC22.19■■□□□ 1.14
PTP4A3O75365 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTP4A3O75365 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PTP4A3O75365 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PTP4A3O75365 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTP4A3O75365 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.19■■□□□ 1.14
PTP4A3O75365 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTP4A3O75365 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PTP4A3O75365 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.18■■□□□ 1.14
PTP4A3O75365 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PTP4A3O75365 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PTP4A3O75365 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PTP4A3O75365 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTP4A3O75365 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTP4A3O75365 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTP4A3O75365 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.17■■□□□ 1.14
PTP4A3O75365 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.16■■□□□ 1.14
PTP4A3O75365 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTP4A3O75365 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.16■■□□□ 1.14
PTP4A3O75365 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.16■■□□□ 1.14
PTP4A3O75365 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.16■■□□□ 1.14
PTP4A3O75365 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTP4A3O75365 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
PTP4A3O75365 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PTP4A3O75365 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTP4A3O75365 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.15■■□□□ 1.14
PTP4A3O75365 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTP4A3O75365 AC008813.1-201ENST00000536597 885 ntBASIC22.15■■□□□ 1.14
PTP4A3O75365 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.15■■□□□ 1.14
PTP4A3O75365 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTP4A3O75365 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PTP4A3O75365 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PTP4A3O75365 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PTP4A3O75365 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PTP4A3O75365 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PTP4A3O75365 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTP4A3O75365 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTP4A3O75365 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTP4A3O75365 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms