Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
OPHN1O60890 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
OPHN1O60890 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
OPHN1O60890 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
OPHN1O60890 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.66■■□□□ 1.7
OPHN1O60890 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
OPHN1O60890 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
OPHN1O60890 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
OPHN1O60890 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
OPHN1O60890 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
OPHN1O60890 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
OPHN1O60890 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
OPHN1O60890 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
OPHN1O60890 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
OPHN1O60890 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
OPHN1O60890 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
OPHN1O60890 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
OPHN1O60890 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
OPHN1O60890 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
OPHN1O60890 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
OPHN1O60890 NTF6A-201ENST00000591175 560 ntBASIC25.62■■□□□ 1.69
OPHN1O60890 AC022413.1-201ENST00000624602 984 ntBASIC25.62■■□□□ 1.69
OPHN1O60890 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.62■■□□□ 1.69
OPHN1O60890 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.61■■□□□ 1.69
OPHN1O60890 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
OPHN1O60890 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
OPHN1O60890 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
OPHN1O60890 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
OPHN1O60890 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
OPHN1O60890 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
OPHN1O60890 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
OPHN1O60890 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.6■■□□□ 1.69
OPHN1O60890 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
OPHN1O60890 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
OPHN1O60890 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.6■■□□□ 1.69
OPHN1O60890 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.6■■□□□ 1.69
OPHN1O60890 AC012354.3-201ENST00000623734 483 ntBASIC25.6■■□□□ 1.69
OPHN1O60890 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
OPHN1O60890 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
OPHN1O60890 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
OPHN1O60890 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
OPHN1O60890 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.58■■□□□ 1.69
OPHN1O60890 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.58■■□□□ 1.69
OPHN1O60890 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
OPHN1O60890 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.57■■□□□ 1.68
OPHN1O60890 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
OPHN1O60890 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
OPHN1O60890 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.57■■□□□ 1.68
OPHN1O60890 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
OPHN1O60890 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
OPHN1O60890 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
OPHN1O60890 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
OPHN1O60890 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
OPHN1O60890 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.54■■□□□ 1.68
OPHN1O60890 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
OPHN1O60890 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
OPHN1O60890 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
OPHN1O60890 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
OPHN1O60890 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.53■■□□□ 1.68
OPHN1O60890 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
OPHN1O60890 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
OPHN1O60890 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.52■■□□□ 1.68
OPHN1O60890 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
OPHN1O60890 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.52■■□□□ 1.68
OPHN1O60890 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.52■■□□□ 1.68
OPHN1O60890 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.52■■□□□ 1.68
OPHN1O60890 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
OPHN1O60890 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.52■■□□□ 1.68
OPHN1O60890 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
OPHN1O60890 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.51■■□□□ 1.67
OPHN1O60890 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
OPHN1O60890 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
OPHN1O60890 AC135731.1-201ENST00000569415 2548 ntBASIC25.51■■□□□ 1.67
OPHN1O60890 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
OPHN1O60890 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
OPHN1O60890 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
OPHN1O60890 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
OPHN1O60890 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
OPHN1O60890 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
OPHN1O60890 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.49■■□□□ 1.67
OPHN1O60890 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.49■■□□□ 1.67
OPHN1O60890 AC008813.1-201ENST00000536597 885 ntBASIC25.49■■□□□ 1.67
OPHN1O60890 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
OPHN1O60890 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
OPHN1O60890 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
OPHN1O60890 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
OPHN1O60890 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.48■■□□□ 1.67
OPHN1O60890 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.47■■□□□ 1.67
OPHN1O60890 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
OPHN1O60890 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
OPHN1O60890 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.47■■□□□ 1.67
OPHN1O60890 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.47■■□□□ 1.67
OPHN1O60890 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
OPHN1O60890 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.46■■□□□ 1.67
OPHN1O60890 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
OPHN1O60890 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.46■■□□□ 1.67
OPHN1O60890 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
OPHN1O60890 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
OPHN1O60890 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
OPHN1O60890 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms