Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.4■■□□□ 1.34
CASQ2O14958 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CASQ2O14958 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CASQ2O14958 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.39■■□□□ 1.34
CASQ2O14958 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CASQ2O14958 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CASQ2O14958 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CASQ2O14958 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CASQ2O14958 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CASQ2O14958 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CASQ2O14958 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.38■■□□□ 1.33
CASQ2O14958 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CASQ2O14958 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CASQ2O14958 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CASQ2O14958 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CASQ2O14958 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CASQ2O14958 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CASQ2O14958 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CASQ2O14958 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.36■■□□□ 1.33
CASQ2O14958 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CASQ2O14958 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
CASQ2O14958 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CASQ2O14958 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CASQ2O14958 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CASQ2O14958 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CASQ2O14958 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CASQ2O14958 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CASQ2O14958 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
CASQ2O14958 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
CASQ2O14958 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CASQ2O14958 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CASQ2O14958 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.34■■□□□ 1.33
CASQ2O14958 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.34■■□□□ 1.33
CASQ2O14958 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CASQ2O14958 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CASQ2O14958 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CASQ2O14958 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CASQ2O14958 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.33■■□□□ 1.33
CASQ2O14958 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CASQ2O14958 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CASQ2O14958 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CASQ2O14958 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.32■■□□□ 1.32
CASQ2O14958 AC133561.1-201ENST00000568600 2415 ntBASIC23.32■■□□□ 1.32
CASQ2O14958 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CASQ2O14958 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CASQ2O14958 AC142381.3-201ENST00000568208 1670 ntBASIC23.32■■□□□ 1.32
CASQ2O14958 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CASQ2O14958 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CASQ2O14958 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CASQ2O14958 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CASQ2O14958 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.31■■□□□ 1.32
CASQ2O14958 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CASQ2O14958 AC012676.1-201ENST00000574705 1949 ntBASIC23.31■■□□□ 1.32
CASQ2O14958 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CASQ2O14958 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CASQ2O14958 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.3■■□□□ 1.32
CASQ2O14958 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.29■■□□□ 1.32
CASQ2O14958 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.29■■□□□ 1.32
CASQ2O14958 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.29■■□□□ 1.32
CASQ2O14958 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CASQ2O14958 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CASQ2O14958 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CASQ2O14958 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CASQ2O14958 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CASQ2O14958 AL133380.1-201ENST00000506013 324 ntBASIC23.28■■□□□ 1.32
CASQ2O14958 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CASQ2O14958 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.28■■□□□ 1.32
CASQ2O14958 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CASQ2O14958 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CASQ2O14958 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASQ2O14958 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASQ2O14958 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CASQ2O14958 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.27■■□□□ 1.32
CASQ2O14958 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASQ2O14958 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASQ2O14958 AP004609.3-201ENST00000610705 1884 ntBASIC23.27■■□□□ 1.32
CASQ2O14958 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASQ2O14958 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASQ2O14958 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASQ2O14958 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASQ2O14958 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASQ2O14958 ZNRF2P1-201ENST00000441407 443 ntBASIC23.26■■□□□ 1.31
CASQ2O14958 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.26■■□□□ 1.31
CASQ2O14958 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASQ2O14958 AL139125.2-201ENST00000623134 1869 ntBASIC23.26■■□□□ 1.31
CASQ2O14958 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASQ2O14958 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASQ2O14958 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASQ2O14958 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CASQ2O14958 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CASQ2O14958 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CASQ2O14958 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CASQ2O14958 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CASQ2O14958 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.24■■□□□ 1.31
CASQ2O14958 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASQ2O14958 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CASQ2O14958 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASQ2O14958 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASQ2O14958 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASQ2O14958 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms