Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01548A6NM66 AC126177.7-201ENST00000547904 679 ntBASIC19.6■□□□□ 0.73
LINC01548A6NM66 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.6■□□□□ 0.73
LINC01548A6NM66 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01548A6NM66 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01548A6NM66 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01548A6NM66 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
LINC01548A6NM66 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.59■□□□□ 0.73
LINC01548A6NM66 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01548A6NM66 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01548A6NM66 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01548A6NM66 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01548A6NM66 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LINC01548A6NM66 AL449106.1-201ENST00000608517 1980 ntBASIC19.58■□□□□ 0.73
LINC01548A6NM66 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LINC01548A6NM66 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.58■□□□□ 0.72
LINC01548A6NM66 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.58■□□□□ 0.72
LINC01548A6NM66 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LINC01548A6NM66 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LINC01548A6NM66 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LINC01548A6NM66 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LINC01548A6NM66 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01548A6NM66 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01548A6NM66 AC092296.2-201ENST00000589470 999 ntBASIC19.57■□□□□ 0.72
LINC01548A6NM66 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01548A6NM66 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01548A6NM66 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01548A6NM66 RNF126P1-201ENST00000567452 1320 ntBASIC19.56■□□□□ 0.72
LINC01548A6NM66 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LINC01548A6NM66 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01548A6NM66 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01548A6NM66 AL157400.5-201ENST00000507624 621 ntBASIC19.56■□□□□ 0.72
LINC01548A6NM66 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01548A6NM66 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.55■□□□□ 0.72
LINC01548A6NM66 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LINC01548A6NM66 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LINC01548A6NM66 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.54■□□□□ 0.72
LINC01548A6NM66 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01548A6NM66 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01548A6NM66 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01548A6NM66 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01548A6NM66 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LINC01548A6NM66 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.53■□□□□ 0.72
LINC01548A6NM66 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01548A6NM66 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01548A6NM66 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01548A6NM66 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LINC01548A6NM66 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.53■□□□□ 0.72
LINC01548A6NM66 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01548A6NM66 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01548A6NM66 RARRES2P2-201ENST00000394842 485 ntBASIC19.52■□□□□ 0.72
LINC01548A6NM66 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.52■□□□□ 0.72
LINC01548A6NM66 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.52■□□□□ 0.72
LINC01548A6NM66 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC01548A6NM66 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01548A6NM66 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.51■□□□□ 0.71
LINC01548A6NM66 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.51■□□□□ 0.71
LINC01548A6NM66 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.51■□□□□ 0.71
LINC01548A6NM66 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LINC01548A6NM66 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01548A6NM66 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01548A6NM66 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01548A6NM66 ECEL1P2-201ENST00000461596 1295 ntBASIC19.5■□□□□ 0.71
LINC01548A6NM66 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01548A6NM66 AL359504.2-201ENST00000605506 1601 ntBASIC19.5■□□□□ 0.71
LINC01548A6NM66 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01548A6NM66 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01548A6NM66 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC01548A6NM66 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
LINC01548A6NM66 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01548A6NM66 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.48■□□□□ 0.71
LINC01548A6NM66 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.48■□□□□ 0.71
LINC01548A6NM66 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01548A6NM66 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01548A6NM66 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01548A6NM66 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01548A6NM66 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01548A6NM66 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.48■□□□□ 0.71
LINC01548A6NM66 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01548A6NM66 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.47■□□□□ 0.71
LINC01548A6NM66 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01548A6NM66 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01548A6NM66 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01548A6NM66 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01548A6NM66 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01548A6NM66 SMPD5-203ENST00000639008 1464 ntBASIC19.46■□□□□ 0.71
LINC01548A6NM66 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.45■□□□□ 0.7
LINC01548A6NM66 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LINC01548A6NM66 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01548A6NM66 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01548A6NM66 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LINC01548A6NM66 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC01548A6NM66 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC01548A6NM66 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01548A6NM66 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01548A6NM66 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01548A6NM66 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01548A6NM66 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01548A6NM66 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01548A6NM66 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms