Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM223BA6NKX1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.29■□□□□ 0.68
FAM223BA6NKX1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM223BA6NKX1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FAM223BA6NKX1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM223BA6NKX1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM223BA6NKX1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FAM223BA6NKX1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM223BA6NKX1 MIR4449-201ENST00000578365 66 ntBASIC19.28■□□□□ 0.68
FAM223BA6NKX1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
FAM223BA6NKX1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM223BA6NKX1 AL359258.2-201ENST00000564063 1566 ntBASIC19.27■□□□□ 0.68
FAM223BA6NKX1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
FAM223BA6NKX1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM223BA6NKX1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM223BA6NKX1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM223BA6NKX1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM223BA6NKX1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.26■□□□□ 0.67
FAM223BA6NKX1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.26■□□□□ 0.67
FAM223BA6NKX1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM223BA6NKX1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM223BA6NKX1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.25■□□□□ 0.67
FAM223BA6NKX1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM223BA6NKX1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM223BA6NKX1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.24■□□□□ 0.67
FAM223BA6NKX1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FAM223BA6NKX1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM223BA6NKX1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.24■□□□□ 0.67
FAM223BA6NKX1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FAM223BA6NKX1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM223BA6NKX1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FAM223BA6NKX1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM223BA6NKX1 AC142472.1-201ENST00000612013 1741 ntBASIC19.22■□□□□ 0.67
FAM223BA6NKX1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM223BA6NKX1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM223BA6NKX1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM223BA6NKX1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.22■□□□□ 0.67
FAM223BA6NKX1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.22■□□□□ 0.67
FAM223BA6NKX1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
FAM223BA6NKX1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM223BA6NKX1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 AP004609.3-201ENST00000610705 1884 ntBASIC19.21■□□□□ 0.67
FAM223BA6NKX1 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
FAM223BA6NKX1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
FAM223BA6NKX1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM223BA6NKX1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FAM223BA6NKX1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FAM223BA6NKX1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.2■□□□□ 0.66
FAM223BA6NKX1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.2■□□□□ 0.66
FAM223BA6NKX1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.2■□□□□ 0.66
FAM223BA6NKX1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM223BA6NKX1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM223BA6NKX1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM223BA6NKX1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.19■□□□□ 0.66
FAM223BA6NKX1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FAM223BA6NKX1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM223BA6NKX1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM223BA6NKX1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM223BA6NKX1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FAM223BA6NKX1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FAM223BA6NKX1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM223BA6NKX1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FAM223BA6NKX1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.16■□□□□ 0.66
FAM223BA6NKX1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM223BA6NKX1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM223BA6NKX1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.15■□□□□ 0.66
FAM223BA6NKX1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM223BA6NKX1 AC060814.1-201ENST00000554326 538 ntBASIC19.15■□□□□ 0.66
FAM223BA6NKX1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM223BA6NKX1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FAM223BA6NKX1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
FAM223BA6NKX1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
FAM223BA6NKX1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
FAM223BA6NKX1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.14■□□□□ 0.65
FAM223BA6NKX1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.14■□□□□ 0.65
FAM223BA6NKX1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FAM223BA6NKX1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FAM223BA6NKX1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FAM223BA6NKX1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FAM223BA6NKX1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM223BA6NKX1 AC022413.1-201ENST00000624602 984 ntBASIC19.13■□□□□ 0.65
FAM223BA6NKX1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM223BA6NKX1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM223BA6NKX1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.13■□□□□ 0.65
FAM223BA6NKX1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FAM223BA6NKX1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.12■□□□□ 0.65
FAM223BA6NKX1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FAM223BA6NKX1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FAM223BA6NKX1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FAM223BA6NKX1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FAM223BA6NKX1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.12■□□□□ 0.65
FAM223BA6NKX1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms