Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 PVT1_1.1-201ENST00000615125 194 ntBASIC38.93■■■■□ 3.82
PLEKHD1A6NEE1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC38.93■■■■□ 3.82
PLEKHD1A6NEE1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC38.92■■■■□ 3.82
PLEKHD1A6NEE1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC38.92■■■■□ 3.82
PLEKHD1A6NEE1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC38.92■■■■□ 3.82
PLEKHD1A6NEE1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
PLEKHD1A6NEE1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
PLEKHD1A6NEE1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
PLEKHD1A6NEE1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
PLEKHD1A6NEE1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
PLEKHD1A6NEE1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
PLEKHD1A6NEE1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
PLEKHD1A6NEE1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC38.89■■■■□ 3.82
PLEKHD1A6NEE1 YBX1P4-201ENST00000392794 808 ntBASIC38.89■■■■□ 3.82
PLEKHD1A6NEE1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC38.89■■■■□ 3.82
PLEKHD1A6NEE1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
PLEKHD1A6NEE1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC38.89■■■■□ 3.82
PLEKHD1A6NEE1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC38.88■■■■□ 3.81
PLEKHD1A6NEE1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC38.87■■■■□ 3.81
PLEKHD1A6NEE1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC38.87■■■■□ 3.81
PLEKHD1A6NEE1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
PLEKHD1A6NEE1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC38.86■■■■□ 3.81
PLEKHD1A6NEE1 HYI-210ENST00000486909 905 ntTSL 5 BASIC38.86■■■■□ 3.81
PLEKHD1A6NEE1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
PLEKHD1A6NEE1 AC018755.3-202ENST00000596210 929 ntBASIC38.86■■■■□ 3.81
PLEKHD1A6NEE1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
PLEKHD1A6NEE1 HES6-204ENST00000409182 863 ntTSL 2 BASIC38.85■■■■□ 3.81
PLEKHD1A6NEE1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC38.85■■■■□ 3.81
PLEKHD1A6NEE1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
PLEKHD1A6NEE1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
PLEKHD1A6NEE1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
PLEKHD1A6NEE1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
PLEKHD1A6NEE1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC38.83■■■■□ 3.81
PLEKHD1A6NEE1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC38.83■■■■□ 3.81
PLEKHD1A6NEE1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC38.83■■■■□ 3.81
PLEKHD1A6NEE1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
PLEKHD1A6NEE1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
PLEKHD1A6NEE1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC38.82■■■■□ 3.8
PLEKHD1A6NEE1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC38.82■■■■□ 3.8
PLEKHD1A6NEE1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC38.82■■■■□ 3.8
PLEKHD1A6NEE1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC38.81■■■■□ 3.8
PLEKHD1A6NEE1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC38.81■■■■□ 3.8
PLEKHD1A6NEE1 MIR4508-201ENST00000584178 70 ntBASIC38.8■■■■□ 3.8
PLEKHD1A6NEE1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC38.8■■■■□ 3.8
PLEKHD1A6NEE1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC38.79■■■■□ 3.8
PLEKHD1A6NEE1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
PLEKHD1A6NEE1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC38.79■■■■□ 3.8
PLEKHD1A6NEE1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
PLEKHD1A6NEE1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC38.78■■■■□ 3.8
PLEKHD1A6NEE1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
PLEKHD1A6NEE1 GUSBP5-201ENST00000418136 578 ntBASIC38.77■■■■□ 3.8
PLEKHD1A6NEE1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
PLEKHD1A6NEE1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC38.76■■■■□ 3.8
PLEKHD1A6NEE1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC38.76■■■■□ 3.8
PLEKHD1A6NEE1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC38.76■■■■□ 3.8
PLEKHD1A6NEE1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC38.75■■■■□ 3.79
PLEKHD1A6NEE1 OR2A1-AS1-204ENST00000470435 602 ntBASIC38.75■■■■□ 3.79
PLEKHD1A6NEE1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC38.74■■■■□ 3.79
PLEKHD1A6NEE1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
PLEKHD1A6NEE1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC38.74■■■■□ 3.79
PLEKHD1A6NEE1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC38.74■■■■□ 3.79
PLEKHD1A6NEE1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
PLEKHD1A6NEE1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC38.73■■■■□ 3.79
PLEKHD1A6NEE1 AP002414.2-202ENST00000590929 1450 ntBASIC38.73■■■■□ 3.79
PLEKHD1A6NEE1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC38.72■■■■□ 3.79
PLEKHD1A6NEE1 AC131212.1-201ENST00000613771 668 ntBASIC38.72■■■■□ 3.79
PLEKHD1A6NEE1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
PLEKHD1A6NEE1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC38.71■■■■□ 3.79
PLEKHD1A6NEE1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
PLEKHD1A6NEE1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC38.71■■■■□ 3.79
PLEKHD1A6NEE1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
PLEKHD1A6NEE1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC38.71■■■■□ 3.79
PLEKHD1A6NEE1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
PLEKHD1A6NEE1 ABCB10P3-201ENST00000561950 2166 ntBASIC38.7■■■■□ 3.79
PLEKHD1A6NEE1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
PLEKHD1A6NEE1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC38.69■■■■□ 3.78
PLEKHD1A6NEE1 THA1P-201ENST00000590384 1145 ntBASIC38.69■■■■□ 3.78
PLEKHD1A6NEE1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC38.68■■■■□ 3.78
PLEKHD1A6NEE1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC38.68■■■■□ 3.78
PLEKHD1A6NEE1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC38.68■■■■□ 3.78
PLEKHD1A6NEE1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
PLEKHD1A6NEE1 AC019069.1-201ENST00000610008 1333 ntBASIC38.67■■■■□ 3.78
PLEKHD1A6NEE1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC38.67■■■■□ 3.78
PLEKHD1A6NEE1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC38.66■■■■□ 3.78
PLEKHD1A6NEE1 AL139393.2-201ENST00000608721 2025 ntBASIC38.66■■■■□ 3.78
PLEKHD1A6NEE1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
PLEKHD1A6NEE1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC38.65■■■■□ 3.78
PLEKHD1A6NEE1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
PLEKHD1A6NEE1 AC103724.3-201ENST00000564481 992 ntBASIC38.65■■■■□ 3.78
PLEKHD1A6NEE1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
PLEKHD1A6NEE1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
PLEKHD1A6NEE1 AL359504.2-201ENST00000605506 1601 ntBASIC38.63■■■■□ 3.78
PLEKHD1A6NEE1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC38.63■■■■□ 3.77
PLEKHD1A6NEE1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC38.63■■■■□ 3.77
PLEKHD1A6NEE1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC38.63■■■■□ 3.77
PLEKHD1A6NEE1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC38.63■■■■□ 3.77
PLEKHD1A6NEE1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC38.62■■■■□ 3.77
PLEKHD1A6NEE1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC38.62■■■■□ 3.77
PLEKHD1A6NEE1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC38.62■■■■□ 3.77
PLEKHD1A6NEE1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms