Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SHISA3A0PJX4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHISA3A0PJX4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHISA3A0PJX4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SHISA3A0PJX4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHISA3A0PJX4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHISA3A0PJX4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHISA3A0PJX4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHISA3A0PJX4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
SHISA3A0PJX4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SHISA3A0PJX4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHISA3A0PJX4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SHISA3A0PJX4 AC142472.1-201ENST00000612013 1741 ntBASIC21.58■■□□□ 1.04
SHISA3A0PJX4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHISA3A0PJX4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SHISA3A0PJX4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SHISA3A0PJX4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHISA3A0PJX4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHISA3A0PJX4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHISA3A0PJX4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHISA3A0PJX4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHISA3A0PJX4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHISA3A0PJX4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.56■■□□□ 1.04
SHISA3A0PJX4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHISA3A0PJX4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.56■■□□□ 1.04
SHISA3A0PJX4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.55■■□□□ 1.04
SHISA3A0PJX4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHISA3A0PJX4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHISA3A0PJX4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHISA3A0PJX4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHISA3A0PJX4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHISA3A0PJX4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHISA3A0PJX4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHISA3A0PJX4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHISA3A0PJX4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHISA3A0PJX4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.53■■□□□ 1.04
SHISA3A0PJX4 LINC00273-201ENST00000539813 1452 ntBASIC21.52■■□□□ 1.04
SHISA3A0PJX4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SHISA3A0PJX4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHISA3A0PJX4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.51■■□□□ 1.03
SHISA3A0PJX4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.51■■□□□ 1.03
SHISA3A0PJX4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHISA3A0PJX4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.51■■□□□ 1.03
SHISA3A0PJX4 AC136428.2-201ENST00000563187 214 ntBASIC21.51■■□□□ 1.03
SHISA3A0PJX4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.51■■□□□ 1.03
SHISA3A0PJX4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SHISA3A0PJX4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SHISA3A0PJX4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.51■■□□□ 1.03
SHISA3A0PJX4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHISA3A0PJX4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHISA3A0PJX4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHISA3A0PJX4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHISA3A0PJX4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHISA3A0PJX4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SHISA3A0PJX4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SHISA3A0PJX4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHISA3A0PJX4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
SHISA3A0PJX4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHISA3A0PJX4 MIR762-201ENST00000390236 83 ntBASIC21.49■■□□□ 1.03
SHISA3A0PJX4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SHISA3A0PJX4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SHISA3A0PJX4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
SHISA3A0PJX4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SHISA3A0PJX4 AC142381.3-201ENST00000568208 1670 ntBASIC21.49■■□□□ 1.03
SHISA3A0PJX4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.49■■□□□ 1.03
SHISA3A0PJX4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHISA3A0PJX4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.48■■□□□ 1.03
SHISA3A0PJX4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.48■■□□□ 1.03
SHISA3A0PJX4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHISA3A0PJX4 AC010501.1-201ENST00000606270 1962 ntBASIC21.48■■□□□ 1.03
SHISA3A0PJX4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHISA3A0PJX4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.48■■□□□ 1.03
SHISA3A0PJX4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.48■■□□□ 1.03
SHISA3A0PJX4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.48■■□□□ 1.03
SHISA3A0PJX4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHISA3A0PJX4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHISA3A0PJX4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHISA3A0PJX4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms