Protein–RNA interactions for Protein: A0A1B0GTE1

LOC100289279, Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100289279A0A1B0GTE1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.74■■□□□ 1.07
LOC100289279A0A1B0GTE1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LOC100289279A0A1B0GTE1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.74■■□□□ 1.07
LOC100289279A0A1B0GTE1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LOC100289279A0A1B0GTE1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.74■■□□□ 1.07
LOC100289279A0A1B0GTE1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LOC100289279A0A1B0GTE1 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.73■■□□□ 1.07
LOC100289279A0A1B0GTE1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LOC100289279A0A1B0GTE1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LOC100289279A0A1B0GTE1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.72■■□□□ 1.07
LOC100289279A0A1B0GTE1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LOC100289279A0A1B0GTE1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LOC100289279A0A1B0GTE1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LOC100289279A0A1B0GTE1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LOC100289279A0A1B0GTE1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LOC100289279A0A1B0GTE1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.71■■□□□ 1.07
LOC100289279A0A1B0GTE1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LOC100289279A0A1B0GTE1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LOC100289279A0A1B0GTE1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LOC100289279A0A1B0GTE1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.7■■□□□ 1.06
LOC100289279A0A1B0GTE1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LOC100289279A0A1B0GTE1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.69■■□□□ 1.06
LOC100289279A0A1B0GTE1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LOC100289279A0A1B0GTE1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.69■■□□□ 1.06
LOC100289279A0A1B0GTE1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LOC100289279A0A1B0GTE1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
LOC100289279A0A1B0GTE1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LOC100289279A0A1B0GTE1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.67■■□□□ 1.06
LOC100289279A0A1B0GTE1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LOC100289279A0A1B0GTE1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.67■■□□□ 1.06
LOC100289279A0A1B0GTE1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.67■■□□□ 1.06
LOC100289279A0A1B0GTE1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LOC100289279A0A1B0GTE1 AC018358.1-201ENST00000631079 1402 ntBASIC21.67■■□□□ 1.06
LOC100289279A0A1B0GTE1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LOC100289279A0A1B0GTE1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.67■■□□□ 1.06
LOC100289279A0A1B0GTE1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LOC100289279A0A1B0GTE1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LOC100289279A0A1B0GTE1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LOC100289279A0A1B0GTE1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LOC100289279A0A1B0GTE1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LOC100289279A0A1B0GTE1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LOC100289279A0A1B0GTE1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.65■■□□□ 1.06
LOC100289279A0A1B0GTE1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LOC100289279A0A1B0GTE1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.65■■□□□ 1.06
LOC100289279A0A1B0GTE1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LOC100289279A0A1B0GTE1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LOC100289279A0A1B0GTE1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LOC100289279A0A1B0GTE1 AC145676.1-201ENST00000514988 2004 ntBASIC21.64■■□□□ 1.05
LOC100289279A0A1B0GTE1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LOC100289279A0A1B0GTE1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.64■■□□□ 1.05
LOC100289279A0A1B0GTE1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LOC100289279A0A1B0GTE1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LOC100289279A0A1B0GTE1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LOC100289279A0A1B0GTE1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC100289279A0A1B0GTE1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LOC100289279A0A1B0GTE1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LOC100289279A0A1B0GTE1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
LOC100289279A0A1B0GTE1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.62■■□□□ 1.05
LOC100289279A0A1B0GTE1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
LOC100289279A0A1B0GTE1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
LOC100289279A0A1B0GTE1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.61■■□□□ 1.05
LOC100289279A0A1B0GTE1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.61■■□□□ 1.05
LOC100289279A0A1B0GTE1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC100289279A0A1B0GTE1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC100289279A0A1B0GTE1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.6■■□□□ 1.05
LOC100289279A0A1B0GTE1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LOC100289279A0A1B0GTE1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.6■■□□□ 1.05
LOC100289279A0A1B0GTE1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC100289279A0A1B0GTE1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LOC100289279A0A1B0GTE1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC100289279A0A1B0GTE1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LOC100289279A0A1B0GTE1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LOC100289279A0A1B0GTE1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LOC100289279A0A1B0GTE1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.58■■□□□ 1.05
LOC100289279A0A1B0GTE1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.58■■□□□ 1.05
LOC100289279A0A1B0GTE1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.58■■□□□ 1.04
LOC100289279A0A1B0GTE1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.57■■□□□ 1.04
LOC100289279A0A1B0GTE1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.56■■□□□ 1.04
LOC100289279A0A1B0GTE1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LOC100289279A0A1B0GTE1 AC110285.7-201ENST00000624417 1536 ntBASIC21.56■■□□□ 1.04
LOC100289279A0A1B0GTE1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC100289279A0A1B0GTE1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.56■■□□□ 1.04
LOC100289279A0A1B0GTE1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC100289279A0A1B0GTE1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC100289279A0A1B0GTE1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.56■■□□□ 1.04
LOC100289279A0A1B0GTE1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.55■■□□□ 1.04
LOC100289279A0A1B0GTE1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LOC100289279A0A1B0GTE1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms