Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV10-1A0A0K0K1A3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV10-1A0A0K0K1A3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV10-1A0A0K0K1A3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV10-1A0A0K0K1A3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV10-1A0A0K0K1A3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV10-1A0A0K0K1A3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRBV10-1A0A0K0K1A3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.37■□□□□ 0.37
TRBV10-1A0A0K0K1A3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV10-1A0A0K0K1A3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV10-1A0A0K0K1A3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV10-1A0A0K0K1A3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DUX4L13-201ENST00000554103 1267 ntBASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DUX4L15-201ENST00000611059 1267 ntBASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DUX4L23-201ENST00000615195 1269 ntBASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DUX4L24-201ENST00000617576 1269 ntBASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DUX4L22-201ENST00000618238 1269 ntBASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DUX4L20-201ENST00000619712 1269 ntBASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DUX4L21-201ENST00000622058 1269 ntBASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DUX4L10-201ENST00000622460 1267 ntBASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DUX4L25-201ENST00000624915 1269 ntBASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV10-1A0A0K0K1A3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV10-1A0A0K0K1A3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV10-1A0A0K0K1A3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV10-1A0A0K0K1A3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV10-1A0A0K0K1A3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV10-1A0A0K0K1A3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
TRBV10-1A0A0K0K1A3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.34■□□□□ 0.37
TRBV10-1A0A0K0K1A3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TRBV10-1A0A0K0K1A3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV10-1A0A0K0K1A3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV10-1A0A0K0K1A3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV10-1A0A0K0K1A3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV10-1A0A0K0K1A3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.33■□□□□ 0.37
TRBV10-1A0A0K0K1A3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV10-1A0A0K0K1A3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV10-1A0A0K0K1A3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV10-1A0A0K0K1A3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRBV10-1A0A0K0K1A3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV10-1A0A0K0K1A3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRBV10-1A0A0K0K1A3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRBV10-1A0A0K0K1A3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV10-1A0A0K0K1A3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TRBV10-1A0A0K0K1A3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV10-1A0A0K0K1A3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRBV10-1A0A0K0K1A3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV10-1A0A0K0K1A3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV10-1A0A0K0K1A3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV10-1A0A0K0K1A3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV10-1A0A0K0K1A3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRBV10-1A0A0K0K1A3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV10-1A0A0K0K1A3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV10-1A0A0K0K1A3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRBV10-1A0A0K0K1A3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV10-1A0A0K0K1A3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV10-1A0A0K0K1A3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRBV10-1A0A0K0K1A3 RPS2P35-201ENST00000443417 897 ntBASIC17.31■□□□□ 0.36
TRBV10-1A0A0K0K1A3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV10-1A0A0K0K1A3 AC148477.6-201ENST00000623746 465 ntBASIC17.31■□□□□ 0.36
TRBV10-1A0A0K0K1A3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV10-1A0A0K0K1A3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRBV10-1A0A0K0K1A3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-1A0A0K0K1A3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV10-1A0A0K0K1A3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV10-1A0A0K0K1A3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV10-1A0A0K0K1A3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV10-1A0A0K0K1A3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms