Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 MIR3648-1-201ENST00000615959 180 ntBASIC19.59■□□□□ 0.73
TRBV9A0A0B4J1U6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV9A0A0B4J1U6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV9A0A0B4J1U6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV9A0A0B4J1U6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV9A0A0B4J1U6 AL449106.1-201ENST00000608517 1980 ntBASIC19.58■□□□□ 0.73
TRBV9A0A0B4J1U6 MIR7108-201ENST00000614319 87 ntBASIC19.58■□□□□ 0.72
TRBV9A0A0B4J1U6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.58■□□□□ 0.72
TRBV9A0A0B4J1U6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV9A0A0B4J1U6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRBV9A0A0B4J1U6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV9A0A0B4J1U6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.57■□□□□ 0.72
TRBV9A0A0B4J1U6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV9A0A0B4J1U6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV9A0A0B4J1U6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV9A0A0B4J1U6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV9A0A0B4J1U6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV9A0A0B4J1U6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRBV9A0A0B4J1U6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV9A0A0B4J1U6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV9A0A0B4J1U6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV9A0A0B4J1U6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV9A0A0B4J1U6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRBV9A0A0B4J1U6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV9A0A0B4J1U6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV9A0A0B4J1U6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV9A0A0B4J1U6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRBV9A0A0B4J1U6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBV9A0A0B4J1U6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRBV9A0A0B4J1U6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV9A0A0B4J1U6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV9A0A0B4J1U6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV9A0A0B4J1U6 AC148477.6-201ENST00000623746 465 ntBASIC19.53■□□□□ 0.72
TRBV9A0A0B4J1U6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV9A0A0B4J1U6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRBV9A0A0B4J1U6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV9A0A0B4J1U6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV9A0A0B4J1U6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV9A0A0B4J1U6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV9A0A0B4J1U6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV9A0A0B4J1U6 AC016575.1-201ENST00000607026 382 ntBASIC19.52■□□□□ 0.72
TRBV9A0A0B4J1U6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRBV9A0A0B4J1U6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV9A0A0B4J1U6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV9A0A0B4J1U6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV9A0A0B4J1U6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV9A0A0B4J1U6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRBV9A0A0B4J1U6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRBV9A0A0B4J1U6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV9A0A0B4J1U6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV9A0A0B4J1U6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV9A0A0B4J1U6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV9A0A0B4J1U6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV9A0A0B4J1U6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV9A0A0B4J1U6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
TRBV9A0A0B4J1U6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRBV9A0A0B4J1U6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRBV9A0A0B4J1U6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV9A0A0B4J1U6 HLA-V-202ENST00000446817 847 ntBASIC19.49■□□□□ 0.71
TRBV9A0A0B4J1U6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV9A0A0B4J1U6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV9A0A0B4J1U6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.48■□□□□ 0.71
TRBV9A0A0B4J1U6 MIR219A2-201ENST00000608502 1504 ntBASIC19.48■□□□□ 0.71
TRBV9A0A0B4J1U6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRBV9A0A0B4J1U6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.48■□□□□ 0.71
TRBV9A0A0B4J1U6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV9A0A0B4J1U6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRBV9A0A0B4J1U6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRBV9A0A0B4J1U6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.47■□□□□ 0.71
TRBV9A0A0B4J1U6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV9A0A0B4J1U6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV9A0A0B4J1U6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV9A0A0B4J1U6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV9A0A0B4J1U6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV9A0A0B4J1U6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV9A0A0B4J1U6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
TRBV9A0A0B4J1U6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.46■□□□□ 0.71
TRBV9A0A0B4J1U6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRBV9A0A0B4J1U6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV9A0A0B4J1U6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV9A0A0B4J1U6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TRBV9A0A0B4J1U6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRBV9A0A0B4J1U6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV9A0A0B4J1U6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV9A0A0B4J1U6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV9A0A0B4J1U6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV9A0A0B4J1U6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
TRBV9A0A0B4J1U6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV9A0A0B4J1U6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV9A0A0B4J1U6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV9A0A0B4J1U6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms