Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
MAP1LC3AQ9H492 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MAP1LC3AQ9H492 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
MAP1LC3AQ9H492 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MAP1LC3AQ9H492 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MAP1LC3AQ9H492 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MAP1LC3AQ9H492 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.07■□□□□ 0.48
MAP1LC3AQ9H492 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MAP1LC3AQ9H492 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MAP1LC3AQ9H492 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MAP1LC3AQ9H492 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MAP1LC3AQ9H492 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MAP1LC3AQ9H492 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MAP1LC3AQ9H492 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MAP1LC3AQ9H492 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.06■□□□□ 0.48
MAP1LC3AQ9H492 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MAP1LC3AQ9H492 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
MAP1LC3AQ9H492 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MAP1LC3AQ9H492 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MAP1LC3AQ9H492 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MAP1LC3AQ9H492 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.05■□□□□ 0.48
MAP1LC3AQ9H492 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MAP1LC3AQ9H492 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MAP1LC3AQ9H492 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MAP1LC3AQ9H492 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MAP1LC3AQ9H492 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
MAP1LC3AQ9H492 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MAP1LC3AQ9H492 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.04■□□□□ 0.48
MAP1LC3AQ9H492 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MAP1LC3AQ9H492 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MAP1LC3AQ9H492 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MAP1LC3AQ9H492 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
MAP1LC3AQ9H492 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MAP1LC3AQ9H492 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.03■□□□□ 0.48
MAP1LC3AQ9H492 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MAP1LC3AQ9H492 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MAP1LC3AQ9H492 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MAP1LC3AQ9H492 AC018358.1-201ENST00000631079 1402 ntBASIC18.03■□□□□ 0.48
MAP1LC3AQ9H492 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MAP1LC3AQ9H492 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.03■□□□□ 0.48
MAP1LC3AQ9H492 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MAP1LC3AQ9H492 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MAP1LC3AQ9H492 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
MAP1LC3AQ9H492 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MAP1LC3AQ9H492 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MAP1LC3AQ9H492 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 AL133380.1-201ENST00000506013 324 ntBASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
MAP1LC3AQ9H492 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18■□□□□ 0.47
MAP1LC3AQ9H492 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MAP1LC3AQ9H492 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18■□□□□ 0.47
MAP1LC3AQ9H492 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
MAP1LC3AQ9H492 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
MAP1LC3AQ9H492 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.99■□□□□ 0.47
MAP1LC3AQ9H492 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MAP1LC3AQ9H492 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.99■□□□□ 0.47
MAP1LC3AQ9H492 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MAP1LC3AQ9H492 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.98■□□□□ 0.47
MAP1LC3AQ9H492 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MAP1LC3AQ9H492 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MAP1LC3AQ9H492 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MAP1LC3AQ9H492 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MAP1LC3AQ9H492 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.98■□□□□ 0.47
MAP1LC3AQ9H492 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MAP1LC3AQ9H492 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MAP1LC3AQ9H492 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MAP1LC3AQ9H492 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MAP1LC3AQ9H492 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
MAP1LC3AQ9H492 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MAP1LC3AQ9H492 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MAP1LC3AQ9H492 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.96■□□□□ 0.47
MAP1LC3AQ9H492 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MAP1LC3AQ9H492 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MAP1LC3AQ9H492 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MAP1LC3AQ9H492 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.95■□□□□ 0.46
MAP1LC3AQ9H492 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.95■□□□□ 0.46
MAP1LC3AQ9H492 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
MAP1LC3AQ9H492 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.95■□□□□ 0.46
MAP1LC3AQ9H492 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MAP1LC3AQ9H492 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MAP1LC3AQ9H492 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MAP1LC3AQ9H492 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MAP1LC3AQ9H492 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms