Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
VRK1Q99986 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VRK1Q99986 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VRK1Q99986 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VRK1Q99986 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VRK1Q99986 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VRK1Q99986 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
VRK1Q99986 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK1Q99986 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VRK1Q99986 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.74■■□□□ 1.07
VRK1Q99986 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VRK1Q99986 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.73■■□□□ 1.07
VRK1Q99986 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
VRK1Q99986 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.72■■□□□ 1.07
VRK1Q99986 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRK1Q99986 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
VRK1Q99986 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VRK1Q99986 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
VRK1Q99986 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.72■■□□□ 1.07
VRK1Q99986 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.72■■□□□ 1.07
VRK1Q99986 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VRK1Q99986 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.71■■□□□ 1.07
VRK1Q99986 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VRK1Q99986 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.71■■□□□ 1.07
VRK1Q99986 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VRK1Q99986 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VRK1Q99986 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
VRK1Q99986 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK1Q99986 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
VRK1Q99986 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK1Q99986 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK1Q99986 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.7■■□□□ 1.06
VRK1Q99986 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK1Q99986 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.7■■□□□ 1.06
VRK1Q99986 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
VRK1Q99986 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRK1Q99986 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
VRK1Q99986 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.69■■□□□ 1.06
VRK1Q99986 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.69■■□□□ 1.06
VRK1Q99986 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
VRK1Q99986 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRK1Q99986 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRK1Q99986 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRK1Q99986 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.69■■□□□ 1.06
VRK1Q99986 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
VRK1Q99986 DRD5P2-201ENST00000421395 2012 ntBASIC21.68■■□□□ 1.06
VRK1Q99986 AL139393.2-201ENST00000608721 2025 ntBASIC21.68■■□□□ 1.06
VRK1Q99986 GPX1-201ENST00000419349 1106 ntBASIC21.68■■□□□ 1.06
VRK1Q99986 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.68■■□□□ 1.06
VRK1Q99986 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.68■■□□□ 1.06
VRK1Q99986 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VRK1Q99986 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VRK1Q99986 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VRK1Q99986 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRK1Q99986 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRK1Q99986 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRK1Q99986 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VRK1Q99986 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.66■■□□□ 1.06
VRK1Q99986 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VRK1Q99986 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VRK1Q99986 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VRK1Q99986 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.66■■□□□ 1.06
VRK1Q99986 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VRK1Q99986 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
VRK1Q99986 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VRK1Q99986 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VRK1Q99986 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VRK1Q99986 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VRK1Q99986 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
VRK1Q99986 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.64■■□□□ 1.06
VRK1Q99986 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VRK1Q99986 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VRK1Q99986 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.64■■□□□ 1.05
VRK1Q99986 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
VRK1Q99986 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
VRK1Q99986 AC022413.1-201ENST00000624602 984 ntBASIC21.63■■□□□ 1.05
VRK1Q99986 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VRK1Q99986 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
VRK1Q99986 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.63■■□□□ 1.05
VRK1Q99986 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
VRK1Q99986 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.62■■□□□ 1.05
VRK1Q99986 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.62■■□□□ 1.05
VRK1Q99986 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.62■■□□□ 1.05
VRK1Q99986 AP004833.2-201ENST00000532228 1454 ntBASIC21.62■■□□□ 1.05
VRK1Q99986 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VRK1Q99986 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VRK1Q99986 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRK1Q99986 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRK1Q99986 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VRK1Q99986 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.61■■□□□ 1.05
VRK1Q99986 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
VRK1Q99986 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.61■■□□□ 1.05
VRK1Q99986 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.6■■□□□ 1.05
VRK1Q99986 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.6■■□□□ 1.05
VRK1Q99986 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRK1Q99986 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRK1Q99986 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VRK1Q99986 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRK1Q99986 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.59■■□□□ 1.05
VRK1Q99986 AC100797.4-201ENST00000631653 1827 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms