Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.69■■□□□ 1.54
PTCD3Q96EY7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.69■■□□□ 1.54
PTCD3Q96EY7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.69■■□□□ 1.54
PTCD3Q96EY7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.68■■□□□ 1.54
PTCD3Q96EY7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
PTCD3Q96EY7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.68■■□□□ 1.54
PTCD3Q96EY7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PTCD3Q96EY7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.68■■□□□ 1.54
PTCD3Q96EY7 WHAMMP2-203ENST00000563942 1603 ntBASIC24.68■■□□□ 1.54
PTCD3Q96EY7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PTCD3Q96EY7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PTCD3Q96EY7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PTCD3Q96EY7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.67■■□□□ 1.54
PTCD3Q96EY7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.66■■□□□ 1.54
PTCD3Q96EY7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PTCD3Q96EY7 AC145676.1-201ENST00000514988 2004 ntBASIC24.66■■□□□ 1.54
PTCD3Q96EY7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.65■■□□□ 1.54
PTCD3Q96EY7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PTCD3Q96EY7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PTCD3Q96EY7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PTCD3Q96EY7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.65■■□□□ 1.54
PTCD3Q96EY7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PTCD3Q96EY7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PTCD3Q96EY7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.64■■□□□ 1.53
PTCD3Q96EY7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PTCD3Q96EY7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PTCD3Q96EY7 DUX4L29-201ENST00000425409 679 ntBASIC24.63■■□□□ 1.53
PTCD3Q96EY7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PTCD3Q96EY7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.63■■□□□ 1.53
PTCD3Q96EY7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.63■■□□□ 1.53
PTCD3Q96EY7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.63■■□□□ 1.53
PTCD3Q96EY7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.62■■□□□ 1.53
PTCD3Q96EY7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCD3Q96EY7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCD3Q96EY7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCD3Q96EY7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PTCD3Q96EY7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCD3Q96EY7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.61■■□□□ 1.53
PTCD3Q96EY7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCD3Q96EY7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PTCD3Q96EY7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCD3Q96EY7 AC021231.2-201ENST00000594613 730 ntBASIC24.61■■□□□ 1.53
PTCD3Q96EY7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCD3Q96EY7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCD3Q96EY7 AC093323.1-202ENST00000635031 2045 ntBASIC24.61■■□□□ 1.53
PTCD3Q96EY7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.6■■□□□ 1.53
PTCD3Q96EY7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTCD3Q96EY7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTCD3Q96EY7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PTCD3Q96EY7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTCD3Q96EY7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.6■■□□□ 1.53
PTCD3Q96EY7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTCD3Q96EY7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PTCD3Q96EY7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.6■■□□□ 1.53
PTCD3Q96EY7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.59■■□□□ 1.53
PTCD3Q96EY7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PTCD3Q96EY7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PTCD3Q96EY7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PTCD3Q96EY7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PTCD3Q96EY7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PTCD3Q96EY7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD3Q96EY7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD3Q96EY7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD3Q96EY7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD3Q96EY7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PTCD3Q96EY7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.56■■□□□ 1.52
PTCD3Q96EY7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
PTCD3Q96EY7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.55■■□□□ 1.52
PTCD3Q96EY7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PTCD3Q96EY7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.54■■□□□ 1.52
PTCD3Q96EY7 AP002414.2-202ENST00000590929 1450 ntBASIC24.54■■□□□ 1.52
PTCD3Q96EY7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCD3Q96EY7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PTCD3Q96EY7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCD3Q96EY7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.53■■□□□ 1.52
PTCD3Q96EY7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.53■■□□□ 1.52
PTCD3Q96EY7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCD3Q96EY7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PTCD3Q96EY7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PTCD3Q96EY7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.52■■□□□ 1.52
PTCD3Q96EY7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
PTCD3Q96EY7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PTCD3Q96EY7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PTCD3Q96EY7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PTCD3Q96EY7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PTCD3Q96EY7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.51■■□□□ 1.51
PTCD3Q96EY7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
PTCD3Q96EY7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
PTCD3Q96EY7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PTCD3Q96EY7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.5■■□□□ 1.51
PTCD3Q96EY7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.5■■□□□ 1.51
PTCD3Q96EY7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PTCD3Q96EY7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.5■■□□□ 1.51
PTCD3Q96EY7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PTCD3Q96EY7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PTCD3Q96EY7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.49■■□□□ 1.51
PTCD3Q96EY7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.49■■□□□ 1.51
PTCD3Q96EY7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PTCD3Q96EY7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
PTCD3Q96EY7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms