Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.23■■■□□ 2.59
RPGRQ92834 AC026202.3-201ENST00000600805 1127 ntBASIC31.23■■■□□ 2.59
RPGRQ92834 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
RPGRQ92834 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RPGRQ92834 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
RPGRQ92834 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
RPGRQ92834 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
RPGRQ92834 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.21■■■□□ 2.59
RPGRQ92834 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
RPGRQ92834 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RPGRQ92834 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.19■■■□□ 2.58
RPGRQ92834 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
RPGRQ92834 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
RPGRQ92834 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
RPGRQ92834 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RPGRQ92834 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.18■■■□□ 2.58
RPGRQ92834 AC025884.2-201ENST00000553429 711 ntBASIC31.18■■■□□ 2.58
RPGRQ92834 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RPGRQ92834 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
RPGRQ92834 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RPGRQ92834 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RPGRQ92834 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.17■■■□□ 2.58
RPGRQ92834 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
RPGRQ92834 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RPGRQ92834 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RPGRQ92834 RP9P-202ENST00000450133 1212 ntBASIC31.16■■■□□ 2.58
RPGRQ92834 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.16■■■□□ 2.58
RPGRQ92834 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.16■■■□□ 2.58
RPGRQ92834 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
RPGRQ92834 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
RPGRQ92834 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
RPGRQ92834 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RPGRQ92834 DUX4L9-201ENST00000449051 1259 ntBASIC31.12■■■□□ 2.57
RPGRQ92834 AC093536.1-201ENST00000569153 554 ntBASIC31.12■■■□□ 2.57
RPGRQ92834 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RPGRQ92834 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RPGRQ92834 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RPGRQ92834 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RPGRQ92834 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
RPGRQ92834 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.11■■■□□ 2.57
RPGRQ92834 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
RPGRQ92834 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.1■■■□□ 2.57
RPGRQ92834 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.1■■■□□ 2.57
RPGRQ92834 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.09■■■□□ 2.57
RPGRQ92834 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
RPGRQ92834 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
RPGRQ92834 BHLHE23-202ENST00000612929 1109 ntBASIC31.08■■■□□ 2.57
RPGRQ92834 AL035685.1-201ENST00000636663 812 ntBASIC31.08■■■□□ 2.57
RPGRQ92834 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RPGRQ92834 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.08■■■□□ 2.57
RPGRQ92834 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.07■■■□□ 2.56
RPGRQ92834 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
RPGRQ92834 AL451085.2-201ENST00000605085 799 ntBASIC31.07■■■□□ 2.56
RPGRQ92834 RAP2CP1-202ENST00000605179 643 ntBASIC31.07■■■□□ 2.56
RPGRQ92834 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.07■■■□□ 2.56
RPGRQ92834 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
RPGRQ92834 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
RPGRQ92834 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.06■■■□□ 2.56
RPGRQ92834 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RPGRQ92834 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RPGRQ92834 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
RPGRQ92834 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RPGRQ92834 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RPGRQ92834 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
RPGRQ92834 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.05■■■□□ 2.56
RPGRQ92834 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RPGRQ92834 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RPGRQ92834 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RPGRQ92834 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.04■■■□□ 2.56
RPGRQ92834 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
RPGRQ92834 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RPGRQ92834 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
RPGRQ92834 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RPGRQ92834 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
RPGRQ92834 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RPGRQ92834 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RPGRQ92834 SPCS2P3-201ENST00000500401 656 ntBASIC31.02■■■□□ 2.56
RPGRQ92834 MIR3960-201ENST00000583311 91 ntBASIC31.02■■■□□ 2.56
RPGRQ92834 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.01■■■□□ 2.55
RPGRQ92834 AC010980.1-201ENST00000587192 1142 ntBASIC31.01■■■□□ 2.55
RPGRQ92834 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
RPGRQ92834 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RPGRQ92834 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31■■■□□ 2.55
RPGRQ92834 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31■■■□□ 2.55
RPGRQ92834 ABCB10P3-201ENST00000561950 2166 ntBASIC31■■■□□ 2.55
RPGRQ92834 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.99■■■□□ 2.55
RPGRQ92834 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.99■■■□□ 2.55
RPGRQ92834 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RPGRQ92834 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.97■■■□□ 2.55
RPGRQ92834 AL139393.2-201ENST00000608721 2025 ntBASIC30.97■■■□□ 2.55
RPGRQ92834 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
RPGRQ92834 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
RPGRQ92834 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.97■■■□□ 2.55
RPGRQ92834 KRT8P33-201ENST00000508125 1423 ntBASIC30.97■■■□□ 2.55
RPGRQ92834 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
RPGRQ92834 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RPGRQ92834 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
RPGRQ92834 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.96■■■□□ 2.55
RPGRQ92834 AC074183.2-201ENST00000623112 922 ntBASIC30.96■■■□□ 2.55
RPGRQ92834 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms