Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.83■□□□□ 0.92
RTN4IP1Q8WWV3 AC135983.2-203ENST00000454486 1613 ntBASIC20.82■□□□□ 0.92
RTN4IP1Q8WWV3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4IP1Q8WWV3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4IP1Q8WWV3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4IP1Q8WWV3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN4IP1Q8WWV3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4IP1Q8WWV3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN4IP1Q8WWV3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4IP1Q8WWV3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4IP1Q8WWV3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4IP1Q8WWV3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RTN4IP1Q8WWV3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RTN4IP1Q8WWV3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.8■□□□□ 0.92
RTN4IP1Q8WWV3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4IP1Q8WWV3 DUX4L29-201ENST00000425409 679 ntBASIC20.8■□□□□ 0.92
RTN4IP1Q8WWV3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4IP1Q8WWV3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4IP1Q8WWV3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RTN4IP1Q8WWV3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4IP1Q8WWV3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RTN4IP1Q8WWV3 AC145676.1-201ENST00000514988 2004 ntBASIC20.79■□□□□ 0.92
RTN4IP1Q8WWV3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4IP1Q8WWV3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.79■□□□□ 0.92
RTN4IP1Q8WWV3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4IP1Q8WWV3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.79■□□□□ 0.92
RTN4IP1Q8WWV3 AC018358.1-201ENST00000631079 1402 ntBASIC20.78■□□□□ 0.92
RTN4IP1Q8WWV3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RTN4IP1Q8WWV3 AC021231.2-201ENST00000594613 730 ntBASIC20.78■□□□□ 0.92
RTN4IP1Q8WWV3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4IP1Q8WWV3 WHAMMP2-203ENST00000563942 1603 ntBASIC20.78■□□□□ 0.92
RTN4IP1Q8WWV3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4IP1Q8WWV3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.77■□□□□ 0.92
RTN4IP1Q8WWV3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RTN4IP1Q8WWV3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4IP1Q8WWV3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4IP1Q8WWV3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RTN4IP1Q8WWV3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4IP1Q8WWV3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4IP1Q8WWV3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.75■□□□□ 0.91
RTN4IP1Q8WWV3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
RTN4IP1Q8WWV3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4IP1Q8WWV3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4IP1Q8WWV3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4IP1Q8WWV3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4IP1Q8WWV3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN4IP1Q8WWV3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4IP1Q8WWV3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RTN4IP1Q8WWV3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RTN4IP1Q8WWV3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4IP1Q8WWV3 AC020928.2-201ENST00000588717 2197 ntBASIC20.72■□□□□ 0.91
RTN4IP1Q8WWV3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.72■□□□□ 0.91
RTN4IP1Q8WWV3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RTN4IP1Q8WWV3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.72■□□□□ 0.91
RTN4IP1Q8WWV3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.72■□□□□ 0.91
RTN4IP1Q8WWV3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.72■□□□□ 0.91
RTN4IP1Q8WWV3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4IP1Q8WWV3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.72■□□□□ 0.91
RTN4IP1Q8WWV3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.71■□□□□ 0.91
RTN4IP1Q8WWV3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.71■□□□□ 0.91
RTN4IP1Q8WWV3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.71■□□□□ 0.91
RTN4IP1Q8WWV3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RTN4IP1Q8WWV3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.7■□□□□ 0.9
RTN4IP1Q8WWV3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RTN4IP1Q8WWV3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.7■□□□□ 0.9
RTN4IP1Q8WWV3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.7■□□□□ 0.9
RTN4IP1Q8WWV3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RTN4IP1Q8WWV3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.7■□□□□ 0.9
RTN4IP1Q8WWV3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4IP1Q8WWV3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4IP1Q8WWV3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4IP1Q8WWV3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4IP1Q8WWV3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4IP1Q8WWV3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.69■□□□□ 0.9
RTN4IP1Q8WWV3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4IP1Q8WWV3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4IP1Q8WWV3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4IP1Q8WWV3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.69■□□□□ 0.9
RTN4IP1Q8WWV3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4IP1Q8WWV3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4IP1Q8WWV3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4IP1Q8WWV3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4IP1Q8WWV3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4IP1Q8WWV3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4IP1Q8WWV3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RTN4IP1Q8WWV3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.67■□□□□ 0.9
RTN4IP1Q8WWV3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
RTN4IP1Q8WWV3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RTN4IP1Q8WWV3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms