Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SPTSSBQ8NFR3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC13.83□□□□□ -0.2
SPTSSBQ8NFR3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSBQ8NFR3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSBQ8NFR3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSBQ8NFR3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSBQ8NFR3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSBQ8NFR3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SPTSSBQ8NFR3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SPTSSBQ8NFR3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTSSBQ8NFR3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSBQ8NFR3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SPTSSBQ8NFR3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSBQ8NFR3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SPTSSBQ8NFR3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC13.8□□□□□ -0.2
SPTSSBQ8NFR3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSBQ8NFR3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSBQ8NFR3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSBQ8NFR3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SPTSSBQ8NFR3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSBQ8NFR3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SPTSSBQ8NFR3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPTSSBQ8NFR3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SPTSSBQ8NFR3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SPTSSBQ8NFR3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPTSSBQ8NFR3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPTSSBQ8NFR3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPTSSBQ8NFR3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTSSBQ8NFR3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SPTSSBQ8NFR3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTSSBQ8NFR3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTSSBQ8NFR3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTSSBQ8NFR3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.78□□□□□ -0.2
SPTSSBQ8NFR3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPTSSBQ8NFR3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPTSSBQ8NFR3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPTSSBQ8NFR3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SPTSSBQ8NFR3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPTSSBQ8NFR3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTSSBQ8NFR3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTSSBQ8NFR3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTSSBQ8NFR3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTSSBQ8NFR3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SPTSSBQ8NFR3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SPTSSBQ8NFR3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC13.76□□□□□ -0.21
SPTSSBQ8NFR3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTSSBQ8NFR3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTSSBQ8NFR3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTSSBQ8NFR3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SPTSSBQ8NFR3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTSSBQ8NFR3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTSSBQ8NFR3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTSSBQ8NFR3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SPTSSBQ8NFR3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SPTSSBQ8NFR3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTSSBQ8NFR3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTSSBQ8NFR3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPTSSBQ8NFR3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPTSSBQ8NFR3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SPTSSBQ8NFR3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SPTSSBQ8NFR3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPTSSBQ8NFR3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SPTSSBQ8NFR3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPTSSBQ8NFR3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPTSSBQ8NFR3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPTSSBQ8NFR3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPTSSBQ8NFR3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC13.73□□□□□ -0.21
SPTSSBQ8NFR3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SPTSSBQ8NFR3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPTSSBQ8NFR3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPTSSBQ8NFR3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPTSSBQ8NFR3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SPTSSBQ8NFR3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPTSSBQ8NFR3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPTSSBQ8NFR3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPTSSBQ8NFR3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPTSSBQ8NFR3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPTSSBQ8NFR3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPTSSBQ8NFR3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SPTSSBQ8NFR3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPTSSBQ8NFR3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC13.71□□□□□ -0.21
SPTSSBQ8NFR3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPTSSBQ8NFR3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SPTSSBQ8NFR3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SPTSSBQ8NFR3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPTSSBQ8NFR3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPTSSBQ8NFR3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms