Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
SCN4BQ8IWT1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SCN4BQ8IWT1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
SCN4BQ8IWT1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SCN4BQ8IWT1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SCN4BQ8IWT1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SCN4BQ8IWT1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SCN4BQ8IWT1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SCN4BQ8IWT1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.43■■□□□ 1.82
SCN4BQ8IWT1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCN4BQ8IWT1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCN4BQ8IWT1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.43■■□□□ 1.82
SCN4BQ8IWT1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.42■■□□□ 1.82
SCN4BQ8IWT1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.42■■□□□ 1.82
SCN4BQ8IWT1 ABHD17AP5-201ENST00000580133 923 ntBASIC26.42■■□□□ 1.82
SCN4BQ8IWT1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCN4BQ8IWT1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
SCN4BQ8IWT1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
SCN4BQ8IWT1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCN4BQ8IWT1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCN4BQ8IWT1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCN4BQ8IWT1 DRD5P2-201ENST00000421395 2012 ntBASIC26.41■■□□□ 1.82
SCN4BQ8IWT1 AL359258.2-201ENST00000564063 1566 ntBASIC26.41■■□□□ 1.82
SCN4BQ8IWT1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.4■■□□□ 1.82
SCN4BQ8IWT1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SCN4BQ8IWT1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.4■■□□□ 1.82
SCN4BQ8IWT1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SCN4BQ8IWT1 AC018358.1-201ENST00000631079 1402 ntBASIC26.39■■□□□ 1.82
SCN4BQ8IWT1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
SCN4BQ8IWT1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.39■■□□□ 1.82
SCN4BQ8IWT1 AC092296.2-201ENST00000589470 999 ntBASIC26.39■■□□□ 1.82
SCN4BQ8IWT1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCN4BQ8IWT1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
SCN4BQ8IWT1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCN4BQ8IWT1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.38■■□□□ 1.81
SCN4BQ8IWT1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SCN4BQ8IWT1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.37■■□□□ 1.81
SCN4BQ8IWT1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.37■■□□□ 1.81
SCN4BQ8IWT1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.37■■□□□ 1.81
SCN4BQ8IWT1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SCN4BQ8IWT1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCN4BQ8IWT1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SCN4BQ8IWT1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCN4BQ8IWT1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
SCN4BQ8IWT1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCN4BQ8IWT1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCN4BQ8IWT1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCN4BQ8IWT1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.35■■□□□ 1.81
SCN4BQ8IWT1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCN4BQ8IWT1 ECEL1P2-201ENST00000461596 1295 ntBASIC26.34■■□□□ 1.81
SCN4BQ8IWT1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCN4BQ8IWT1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
SCN4BQ8IWT1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCN4BQ8IWT1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCN4BQ8IWT1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.33■■□□□ 1.81
SCN4BQ8IWT1 AL157400.5-201ENST00000507624 621 ntBASIC26.33■■□□□ 1.81
SCN4BQ8IWT1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
SCN4BQ8IWT1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SCN4BQ8IWT1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.33■■□□□ 1.8
SCN4BQ8IWT1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
SCN4BQ8IWT1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
SCN4BQ8IWT1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCN4BQ8IWT1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCN4BQ8IWT1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCN4BQ8IWT1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.3■■□□□ 1.8
SCN4BQ8IWT1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.29■■□□□ 1.8
SCN4BQ8IWT1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SCN4BQ8IWT1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SCN4BQ8IWT1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.27■■□□□ 1.8
SCN4BQ8IWT1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
SCN4BQ8IWT1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.27■■□□□ 1.8
SCN4BQ8IWT1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCN4BQ8IWT1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCN4BQ8IWT1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCN4BQ8IWT1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.25■■□□□ 1.79
SCN4BQ8IWT1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SCN4BQ8IWT1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SCN4BQ8IWT1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCN4BQ8IWT1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCN4BQ8IWT1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.24■■□□□ 1.79
SCN4BQ8IWT1 NTF6A-201ENST00000591175 560 ntBASIC26.24■■□□□ 1.79
SCN4BQ8IWT1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCN4BQ8IWT1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SCN4BQ8IWT1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCN4BQ8IWT1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.23■■□□□ 1.79
SCN4BQ8IWT1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCN4BQ8IWT1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.23■■□□□ 1.79
SCN4BQ8IWT1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
SCN4BQ8IWT1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCN4BQ8IWT1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCN4BQ8IWT1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCN4BQ8IWT1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCN4BQ8IWT1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.21■■□□□ 1.79
SCN4BQ8IWT1 U85056.1-201ENST00000616429 682 ntBASIC26.21■■□□□ 1.79
SCN4BQ8IWT1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCN4BQ8IWT1 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.2■■□□□ 1.79
SCN4BQ8IWT1 SMPD5-203ENST00000639008 1464 ntBASIC26.2■■□□□ 1.78
SCN4BQ8IWT1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.2■■□□□ 1.78
SCN4BQ8IWT1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SCN4BQ8IWT1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms