Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.62■■□□□ 1.05
LRRTM1Q86UE6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LRRTM1Q86UE6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
LRRTM1Q86UE6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.61■■□□□ 1.05
LRRTM1Q86UE6 LINC00273-201ENST00000539813 1452 ntBASIC21.61■■□□□ 1.05
LRRTM1Q86UE6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.61■■□□□ 1.05
LRRTM1Q86UE6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LRRTM1Q86UE6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM1Q86UE6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM1Q86UE6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM1Q86UE6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LRRTM1Q86UE6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LRRTM1Q86UE6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRTM1Q86UE6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRTM1Q86UE6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRRTM1Q86UE6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRRTM1Q86UE6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRTM1Q86UE6 AP004609.3-201ENST00000610705 1884 ntBASIC21.58■■□□□ 1.05
LRRTM1Q86UE6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.58■■□□□ 1.05
LRRTM1Q86UE6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
LRRTM1Q86UE6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRTM1Q86UE6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRTM1Q86UE6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.57■■□□□ 1.04
LRRTM1Q86UE6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRTM1Q86UE6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRRTM1Q86UE6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LRRTM1Q86UE6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRTM1Q86UE6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.56■■□□□ 1.04
LRRTM1Q86UE6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.56■■□□□ 1.04
LRRTM1Q86UE6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRRTM1Q86UE6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRTM1Q86UE6 AC108673.1-201ENST00000510422 1159 ntBASIC21.55■■□□□ 1.04
LRRTM1Q86UE6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRTM1Q86UE6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRTM1Q86UE6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM1Q86UE6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM1Q86UE6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
LRRTM1Q86UE6 MIR6090-201ENST00000622481 60 ntBASIC21.54■■□□□ 1.04
LRRTM1Q86UE6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM1Q86UE6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM1Q86UE6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LRRTM1Q86UE6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.53■■□□□ 1.04
LRRTM1Q86UE6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM1Q86UE6 AC005559.1-201ENST00000589661 871 ntBASIC21.53■■□□□ 1.04
LRRTM1Q86UE6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRTM1Q86UE6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM1Q86UE6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRTM1Q86UE6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRTM1Q86UE6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRTM1Q86UE6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRTM1Q86UE6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRTM1Q86UE6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRTM1Q86UE6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
LRRTM1Q86UE6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LRRTM1Q86UE6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRTM1Q86UE6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM1Q86UE6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM1Q86UE6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM1Q86UE6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM1Q86UE6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM1Q86UE6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRTM1Q86UE6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
LRRTM1Q86UE6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM1Q86UE6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM1Q86UE6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM1Q86UE6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LRRTM1Q86UE6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRTM1Q86UE6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRTM1Q86UE6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
LRRTM1Q86UE6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM1Q86UE6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRTM1Q86UE6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM1Q86UE6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM1Q86UE6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRTM1Q86UE6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
LRRTM1Q86UE6 AC142472.1-201ENST00000612013 1741 ntBASIC21.45■■□□□ 1.02
LRRTM1Q86UE6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRTM1Q86UE6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
LRRTM1Q86UE6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRTM1Q86UE6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.45■■□□□ 1.02
LRRTM1Q86UE6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRTM1Q86UE6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRTM1Q86UE6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
LRRTM1Q86UE6 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.44■■□□□ 1.02
LRRTM1Q86UE6 AC093323.1-202ENST00000635031 2045 ntBASIC21.43■■□□□ 1.02
LRRTM1Q86UE6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRTM1Q86UE6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRTM1Q86UE6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRTM1Q86UE6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.43■■□□□ 1.02
LRRTM1Q86UE6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.43■■□□□ 1.02
LRRTM1Q86UE6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRTM1Q86UE6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRTM1Q86UE6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.42■■□□□ 1.02
LRRTM1Q86UE6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRRTM1Q86UE6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.42■■□□□ 1.02
LRRTM1Q86UE6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.42■■□□□ 1.02
LRRTM1Q86UE6 SUZ12P1-203ENST00000578195 985 ntBASIC21.42■■□□□ 1.02
LRRTM1Q86UE6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.41■■□□□ 1.02
LRRTM1Q86UE6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.41■■□□□ 1.02
LRRTM1Q86UE6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms