Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 HSD17B1P1-201ENST00000590052 955 ntBASIC26.32■■□□□ 1.8
CHKAP35790 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.32■■□□□ 1.8
CHKAP35790 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHKAP35790 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
CHKAP35790 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHKAP35790 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.31■■□□□ 1.8
CHKAP35790 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHKAP35790 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHKAP35790 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHKAP35790 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHKAP35790 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHKAP35790 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.29■■□□□ 1.8
CHKAP35790 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.29■■□□□ 1.8
CHKAP35790 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.29■■□□□ 1.8
CHKAP35790 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CHKAP35790 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHKAP35790 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CHKAP35790 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHKAP35790 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHKAP35790 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHKAP35790 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.28■■□□□ 1.8
CHKAP35790 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHKAP35790 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHKAP35790 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHKAP35790 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHKAP35790 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHKAP35790 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHKAP35790 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHKAP35790 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.26■■□□□ 1.79
CHKAP35790 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CHKAP35790 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHKAP35790 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHKAP35790 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.26■■□□□ 1.79
CHKAP35790 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHKAP35790 AC148477.6-201ENST00000623746 465 ntBASIC26.25■■□□□ 1.79
CHKAP35790 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHKAP35790 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CHKAP35790 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHKAP35790 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CHKAP35790 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.24■■□□□ 1.79
CHKAP35790 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
CHKAP35790 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHKAP35790 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHKAP35790 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.23■■□□□ 1.79
CHKAP35790 AC100797.4-201ENST00000631653 1827 ntBASIC26.23■■□□□ 1.79
CHKAP35790 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHKAP35790 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.22■■□□□ 1.79
CHKAP35790 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CHKAP35790 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHKAP35790 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHKAP35790 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHKAP35790 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CHKAP35790 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.21■■□□□ 1.79
CHKAP35790 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHKAP35790 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
CHKAP35790 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.2■■□□□ 1.78
CHKAP35790 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.2■■□□□ 1.78
CHKAP35790 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHKAP35790 LINC01003-201ENST00000564834 1764 ntBASIC26.2■■□□□ 1.78
CHKAP35790 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.2■■□□□ 1.78
CHKAP35790 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.19■■□□□ 1.78
CHKAP35790 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHKAP35790 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHKAP35790 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHKAP35790 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.19■■□□□ 1.78
CHKAP35790 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.19■■□□□ 1.78
CHKAP35790 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHKAP35790 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHKAP35790 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHKAP35790 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHKAP35790 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHKAP35790 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.18■■□□□ 1.78
CHKAP35790 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHKAP35790 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHKAP35790 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.17■■□□□ 1.78
CHKAP35790 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHKAP35790 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.17■■□□□ 1.78
CHKAP35790 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.17■■□□□ 1.78
CHKAP35790 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHKAP35790 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHKAP35790 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHKAP35790 GPX1-201ENST00000419349 1106 ntBASIC26.16■■□□□ 1.78
CHKAP35790 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
CHKAP35790 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
CHKAP35790 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.15■■□□□ 1.78
CHKAP35790 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.15■■□□□ 1.78
CHKAP35790 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.15■■□□□ 1.78
CHKAP35790 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.15■■□□□ 1.78
CHKAP35790 MIR219A2-201ENST00000608502 1504 ntBASIC26.14■■□□□ 1.78
CHKAP35790 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHKAP35790 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHKAP35790 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHKAP35790 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.77
CHKAP35790 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHKAP35790 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHKAP35790 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.13■■□□□ 1.77
CHKAP35790 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHKAP35790 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHKAP35790 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CHKAP35790 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms