Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.69■■□□□ 1.38
PTPN6P29350 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTPN6P29350 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTPN6P29350 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTPN6P29350 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTPN6P29350 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PTPN6P29350 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTPN6P29350 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.68■■□□□ 1.38
PTPN6P29350 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
PTPN6P29350 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PTPN6P29350 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTPN6P29350 AL449106.1-201ENST00000608517 1980 ntBASIC23.67■■□□□ 1.38
PTPN6P29350 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PTPN6P29350 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTPN6P29350 AC091060.1-201ENST00000623524 1766 ntBASIC23.67■■□□□ 1.38
PTPN6P29350 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.66■■□□□ 1.38
PTPN6P29350 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.66■■□□□ 1.38
PTPN6P29350 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.66■■□□□ 1.38
PTPN6P29350 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.66■■□□□ 1.38
PTPN6P29350 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTPN6P29350 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.65■■□□□ 1.38
PTPN6P29350 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.65■■□□□ 1.38
PTPN6P29350 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.64■■□□□ 1.37
PTPN6P29350 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTPN6P29350 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTPN6P29350 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.63■■□□□ 1.37
PTPN6P29350 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTPN6P29350 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.63■■□□□ 1.37
PTPN6P29350 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTPN6P29350 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
PTPN6P29350 LINC01971-201ENST00000617888 1048 ntBASIC23.62■■□□□ 1.37
PTPN6P29350 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PTPN6P29350 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN6P29350 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN6P29350 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.6■■□□□ 1.37
PTPN6P29350 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PTPN6P29350 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTPN6P29350 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PTPN6P29350 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PTPN6P29350 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PTPN6P29350 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTPN6P29350 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.58■■□□□ 1.37
PTPN6P29350 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.58■■□□□ 1.37
PTPN6P29350 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.58■■□□□ 1.37
PTPN6P29350 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PTPN6P29350 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PTPN6P29350 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTPN6P29350 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN6P29350 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PTPN6P29350 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN6P29350 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN6P29350 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.56■■□□□ 1.36
PTPN6P29350 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
PTPN6P29350 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN6P29350 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN6P29350 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PTPN6P29350 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.55■■□□□ 1.36
PTPN6P29350 DUX4L11-201ENST00000611504 1267 ntBASIC23.55■■□□□ 1.36
PTPN6P29350 DUX4L12-201ENST00000614593 1267 ntBASIC23.55■■□□□ 1.36
PTPN6P29350 DUX4L14-201ENST00000621227 1267 ntBASIC23.55■■□□□ 1.36
PTPN6P29350 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN6P29350 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTPN6P29350 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.54■■□□□ 1.36
PTPN6P29350 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.54■■□□□ 1.36
PTPN6P29350 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.53■■□□□ 1.36
PTPN6P29350 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.53■■□□□ 1.36
PTPN6P29350 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.53■■□□□ 1.36
PTPN6P29350 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN6P29350 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN6P29350 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN6P29350 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN6P29350 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN6P29350 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.51■■□□□ 1.35
PTPN6P29350 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PTPN6P29350 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN6P29350 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PTPN6P29350 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.5■■□□□ 1.35
PTPN6P29350 AC145676.1-201ENST00000514988 2004 ntBASIC23.5■■□□□ 1.35
PTPN6P29350 AC110285.7-201ENST00000624417 1536 ntBASIC23.5■■□□□ 1.35
PTPN6P29350 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN6P29350 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.5■■□□□ 1.35
PTPN6P29350 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.49■■□□□ 1.35
PTPN6P29350 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTPN6P29350 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PTPN6P29350 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTPN6P29350 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTPN6P29350 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.48■■□□□ 1.35
PTPN6P29350 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.48■■□□□ 1.35
PTPN6P29350 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.48■■□□□ 1.35
PTPN6P29350 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PTPN6P29350 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTPN6P29350 AC135731.1-201ENST00000569415 2548 ntBASIC23.48■■□□□ 1.35
PTPN6P29350 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PTPN6P29350 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.47■■□□□ 1.35
PTPN6P29350 AP004609.3-201ENST00000610705 1884 ntBASIC23.47■■□□□ 1.35
PTPN6P29350 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.46■■□□□ 1.35
PTPN6P29350 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PTPN6P29350 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PTPN6P29350 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.46■■□□□ 1.35
PTPN6P29350 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms