Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
TNFAIP3P21580 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.63■■□□□ 1.85
TNFAIP3P21580 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
TNFAIP3P21580 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.62■■□□□ 1.85
TNFAIP3P21580 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TNFAIP3P21580 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.62■■□□□ 1.85
TNFAIP3P21580 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
TNFAIP3P21580 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TNFAIP3P21580 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TNFAIP3P21580 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TNFAIP3P21580 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.61■■□□□ 1.85
TNFAIP3P21580 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.61■■□□□ 1.85
TNFAIP3P21580 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TNFAIP3P21580 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.61■■□□□ 1.85
TNFAIP3P21580 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TNFAIP3P21580 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.6■■□□□ 1.85
TNFAIP3P21580 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.6■■□□□ 1.85
TNFAIP3P21580 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TNFAIP3P21580 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TNFAIP3P21580 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.6■■□□□ 1.85
TNFAIP3P21580 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TNFAIP3P21580 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.59■■□□□ 1.85
TNFAIP3P21580 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.59■■□□□ 1.85
TNFAIP3P21580 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
TNFAIP3P21580 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.59■■□□□ 1.85
TNFAIP3P21580 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TNFAIP3P21580 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.58■■□□□ 1.85
TNFAIP3P21580 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
TNFAIP3P21580 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TNFAIP3P21580 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TNFAIP3P21580 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TNFAIP3P21580 AL449106.1-201ENST00000608517 1980 ntBASIC26.57■■□□□ 1.84
TNFAIP3P21580 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
TNFAIP3P21580 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
TNFAIP3P21580 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.57■■□□□ 1.84
TNFAIP3P21580 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TNFAIP3P21580 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TNFAIP3P21580 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TNFAIP3P21580 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TNFAIP3P21580 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TNFAIP3P21580 LINC01971-201ENST00000617888 1048 ntBASIC26.55■■□□□ 1.84
TNFAIP3P21580 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TNFAIP3P21580 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.55■■□□□ 1.84
TNFAIP3P21580 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TNFAIP3P21580 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TNFAIP3P21580 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.54■■□□□ 1.84
TNFAIP3P21580 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.54■■□□□ 1.84
TNFAIP3P21580 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TNFAIP3P21580 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.53■■□□□ 1.84
TNFAIP3P21580 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TNFAIP3P21580 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TNFAIP3P21580 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TNFAIP3P21580 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.52■■□□□ 1.84
TNFAIP3P21580 AP004609.3-201ENST00000610705 1884 ntBASIC26.52■■□□□ 1.84
TNFAIP3P21580 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TNFAIP3P21580 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TNFAIP3P21580 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TNFAIP3P21580 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
TNFAIP3P21580 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.5■■□□□ 1.83
TNFAIP3P21580 WHAMMP3-201ENST00000611636 1609 ntBASIC26.5■■□□□ 1.83
TNFAIP3P21580 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TNFAIP3P21580 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
TNFAIP3P21580 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.49■■□□□ 1.83
TNFAIP3P21580 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.49■■□□□ 1.83
TNFAIP3P21580 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
TNFAIP3P21580 AC091060.1-201ENST00000623524 1766 ntBASIC26.48■■□□□ 1.83
TNFAIP3P21580 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
TNFAIP3P21580 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.47■■□□□ 1.83
TNFAIP3P21580 DUX4L13-201ENST00000554103 1267 ntBASIC26.47■■□□□ 1.83
TNFAIP3P21580 DUX4L15-201ENST00000611059 1267 ntBASIC26.47■■□□□ 1.83
TNFAIP3P21580 DUX4L23-201ENST00000615195 1269 ntBASIC26.47■■□□□ 1.83
TNFAIP3P21580 DUX4L24-201ENST00000617576 1269 ntBASIC26.47■■□□□ 1.83
TNFAIP3P21580 DUX4L22-201ENST00000618238 1269 ntBASIC26.47■■□□□ 1.83
TNFAIP3P21580 DUX4L20-201ENST00000619712 1269 ntBASIC26.47■■□□□ 1.83
TNFAIP3P21580 DUX4L21-201ENST00000622058 1269 ntBASIC26.47■■□□□ 1.83
TNFAIP3P21580 DUX4L10-201ENST00000622460 1267 ntBASIC26.47■■□□□ 1.83
TNFAIP3P21580 DUX4L25-201ENST00000624915 1269 ntBASIC26.47■■□□□ 1.83
TNFAIP3P21580 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.46■■□□□ 1.83
TNFAIP3P21580 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TNFAIP3P21580 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
TNFAIP3P21580 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
TNFAIP3P21580 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TNFAIP3P21580 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TNFAIP3P21580 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.45■■□□□ 1.82
TNFAIP3P21580 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
TNFAIP3P21580 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TNFAIP3P21580 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TNFAIP3P21580 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TNFAIP3P21580 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TNFAIP3P21580 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.44■■□□□ 1.82
TNFAIP3P21580 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TNFAIP3P21580 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.43■■□□□ 1.82
TNFAIP3P21580 DUX4L11-201ENST00000611504 1267 ntBASIC26.43■■□□□ 1.82
TNFAIP3P21580 DUX4L12-201ENST00000614593 1267 ntBASIC26.43■■□□□ 1.82
TNFAIP3P21580 DUX4L14-201ENST00000621227 1267 ntBASIC26.43■■□□□ 1.82
TNFAIP3P21580 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TNFAIP3P21580 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
TNFAIP3P21580 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
TNFAIP3P21580 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
TNFAIP3P21580 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms