Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
HCN1O60741 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HCN1O60741 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.14■■□□□ 1.29
HCN1O60741 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HCN1O60741 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
HCN1O60741 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HCN1O60741 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.13■■□□□ 1.29
HCN1O60741 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HCN1O60741 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
HCN1O60741 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
HCN1O60741 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.13■■□□□ 1.29
HCN1O60741 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.12■■□□□ 1.29
HCN1O60741 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HCN1O60741 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HCN1O60741 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.12■■□□□ 1.29
HCN1O60741 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.12■■□□□ 1.29
HCN1O60741 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
HCN1O60741 AC100797.4-201ENST00000631653 1827 ntBASIC23.12■■□□□ 1.29
HCN1O60741 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HCN1O60741 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HCN1O60741 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
HCN1O60741 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.11■■□□□ 1.29
HCN1O60741 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HCN1O60741 AC110285.7-201ENST00000624417 1536 ntBASIC23.1■■□□□ 1.29
HCN1O60741 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HCN1O60741 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.1■■□□□ 1.29
HCN1O60741 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
HCN1O60741 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
HCN1O60741 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HCN1O60741 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCN1O60741 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCN1O60741 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.09■■□□□ 1.29
HCN1O60741 LINC01003-201ENST00000564834 1764 ntBASIC23.09■■□□□ 1.29
HCN1O60741 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.09■■□□□ 1.29
HCN1O60741 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HCN1O60741 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.08■■□□□ 1.29
HCN1O60741 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HCN1O60741 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HCN1O60741 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.07■■□□□ 1.28
HCN1O60741 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HCN1O60741 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
HCN1O60741 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
HCN1O60741 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HCN1O60741 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HCN1O60741 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
HCN1O60741 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HCN1O60741 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HCN1O60741 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
HCN1O60741 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.06■■□□□ 1.28
HCN1O60741 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
HCN1O60741 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HCN1O60741 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.06■■□□□ 1.28
HCN1O60741 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
HCN1O60741 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.05■■□□□ 1.28
HCN1O60741 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HCN1O60741 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.04■■□□□ 1.28
HCN1O60741 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HCN1O60741 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.04■■□□□ 1.28
HCN1O60741 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.04■■□□□ 1.28
HCN1O60741 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HCN1O60741 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
HCN1O60741 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HCN1O60741 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HCN1O60741 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HCN1O60741 AP002414.2-202ENST00000590929 1450 ntBASIC23.03■■□□□ 1.28
HCN1O60741 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HCN1O60741 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.02■■□□□ 1.28
HCN1O60741 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HCN1O60741 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
HCN1O60741 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
HCN1O60741 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HCN1O60741 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HCN1O60741 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HCN1O60741 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.01■■□□□ 1.27
HCN1O60741 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HCN1O60741 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HCN1O60741 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HCN1O60741 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.01■■□□□ 1.27
HCN1O60741 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.01■■□□□ 1.27
HCN1O60741 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23■■□□□ 1.27
HCN1O60741 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HCN1O60741 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HCN1O60741 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HCN1O60741 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.99■■□□□ 1.27
HCN1O60741 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.99■■□□□ 1.27
HCN1O60741 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HCN1O60741 AC148477.6-201ENST00000623746 465 ntBASIC22.99■■□□□ 1.27
HCN1O60741 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HCN1O60741 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HCN1O60741 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HCN1O60741 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HCN1O60741 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HCN1O60741 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HCN1O60741 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.98■■□□□ 1.27
HCN1O60741 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.98■■□□□ 1.27
HCN1O60741 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HCN1O60741 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HCN1O60741 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.98■■□□□ 1.27
HCN1O60741 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
HCN1O60741 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms