Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
AP3B1O00203 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
AP3B1O00203 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
AP3B1O00203 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
AP3B1O00203 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
AP3B1O00203 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
AP3B1O00203 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
AP3B1O00203 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
AP3B1O00203 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.16■■□□□ 1.62
AP3B1O00203 DUX4L13-201ENST00000554103 1267 ntBASIC25.16■■□□□ 1.62
AP3B1O00203 DUX4L15-201ENST00000611059 1267 ntBASIC25.16■■□□□ 1.62
AP3B1O00203 DUX4L23-201ENST00000615195 1269 ntBASIC25.16■■□□□ 1.62
AP3B1O00203 DUX4L24-201ENST00000617576 1269 ntBASIC25.16■■□□□ 1.62
AP3B1O00203 DUX4L22-201ENST00000618238 1269 ntBASIC25.16■■□□□ 1.62
AP3B1O00203 DUX4L20-201ENST00000619712 1269 ntBASIC25.16■■□□□ 1.62
AP3B1O00203 DUX4L21-201ENST00000622058 1269 ntBASIC25.16■■□□□ 1.62
AP3B1O00203 DUX4L10-201ENST00000622460 1267 ntBASIC25.16■■□□□ 1.62
AP3B1O00203 DUX4L25-201ENST00000624915 1269 ntBASIC25.16■■□□□ 1.62
AP3B1O00203 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.16■■□□□ 1.62
AP3B1O00203 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
AP3B1O00203 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
AP3B1O00203 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
AP3B1O00203 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.15■■□□□ 1.62
AP3B1O00203 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.14■■□□□ 1.62
AP3B1O00203 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.14■■□□□ 1.62
AP3B1O00203 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
AP3B1O00203 AC008813.1-201ENST00000536597 885 ntBASIC25.13■■□□□ 1.61
AP3B1O00203 WHAMMP3-201ENST00000611636 1609 ntBASIC25.12■■□□□ 1.61
AP3B1O00203 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
AP3B1O00203 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
AP3B1O00203 AL449106.1-201ENST00000608517 1980 ntBASIC25.12■■□□□ 1.61
AP3B1O00203 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
AP3B1O00203 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
AP3B1O00203 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
AP3B1O00203 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.1■■□□□ 1.61
AP3B1O00203 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.1■■□□□ 1.61
AP3B1O00203 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
AP3B1O00203 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
AP3B1O00203 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
AP3B1O00203 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.08■■□□□ 1.61
AP3B1O00203 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
AP3B1O00203 DUX4L11-201ENST00000611504 1267 ntBASIC25.08■■□□□ 1.61
AP3B1O00203 DUX4L12-201ENST00000614593 1267 ntBASIC25.08■■□□□ 1.61
AP3B1O00203 DUX4L14-201ENST00000621227 1267 ntBASIC25.08■■□□□ 1.61
AP3B1O00203 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
AP3B1O00203 AP004609.3-201ENST00000610705 1884 ntBASIC25.07■■□□□ 1.6
AP3B1O00203 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.07■■□□□ 1.6
AP3B1O00203 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
AP3B1O00203 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
AP3B1O00203 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.06■■□□□ 1.6
AP3B1O00203 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
AP3B1O00203 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
AP3B1O00203 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
AP3B1O00203 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.06■■□□□ 1.6
AP3B1O00203 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
AP3B1O00203 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
AP3B1O00203 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.05■■□□□ 1.6
AP3B1O00203 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
AP3B1O00203 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.04■■□□□ 1.6
AP3B1O00203 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
AP3B1O00203 AC142472.1-201ENST00000612013 1741 ntBASIC25.04■■□□□ 1.6
AP3B1O00203 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.04■■□□□ 1.6
AP3B1O00203 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
AP3B1O00203 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
AP3B1O00203 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
AP3B1O00203 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
AP3B1O00203 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.03■■□□□ 1.6
AP3B1O00203 ZNRF2P2-203ENST00000454624 420 ntBASIC25.03■■□□□ 1.6
AP3B1O00203 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
AP3B1O00203 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
AP3B1O00203 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
AP3B1O00203 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.02■■□□□ 1.6
AP3B1O00203 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
AP3B1O00203 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.02■■□□□ 1.6
AP3B1O00203 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
AP3B1O00203 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.02■■□□□ 1.6
AP3B1O00203 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
AP3B1O00203 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
AP3B1O00203 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
AP3B1O00203 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.01■■□□□ 1.59
AP3B1O00203 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
AP3B1O00203 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
AP3B1O00203 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25■■□□□ 1.59
AP3B1O00203 AC148477.6-201ENST00000623746 465 ntBASIC25■■□□□ 1.59
AP3B1O00203 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25■■□□□ 1.59
AP3B1O00203 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
AP3B1O00203 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
AP3B1O00203 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
AP3B1O00203 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
AP3B1O00203 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
AP3B1O00203 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
AP3B1O00203 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
AP3B1O00203 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.99■■□□□ 1.59
AP3B1O00203 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
AP3B1O00203 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.98■■□□□ 1.59
AP3B1O00203 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
AP3B1O00203 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
AP3B1O00203 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
AP3B1O00203 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.97■■□□□ 1.59
AP3B1O00203 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms