Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SRRM4A7MD48 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.08■□□□□ 0.8
SRRM4A7MD48 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.08■□□□□ 0.8
SRRM4A7MD48 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM4A7MD48 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM4A7MD48 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM4A7MD48 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM4A7MD48 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.07■□□□□ 0.8
SRRM4A7MD48 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM4A7MD48 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.07■□□□□ 0.8
SRRM4A7MD48 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM4A7MD48 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.07■□□□□ 0.8
SRRM4A7MD48 LINC01971-201ENST00000617888 1048 ntBASIC20.07■□□□□ 0.8
SRRM4A7MD48 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.07■□□□□ 0.8
SRRM4A7MD48 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.07■□□□□ 0.8
SRRM4A7MD48 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.06■□□□□ 0.8
SRRM4A7MD48 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM4A7MD48 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SRRM4A7MD48 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.06■□□□□ 0.8
SRRM4A7MD48 AL449106.1-201ENST00000608517 1980 ntBASIC20.05■□□□□ 0.8
SRRM4A7MD48 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.05■□□□□ 0.8
SRRM4A7MD48 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM4A7MD48 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM4A7MD48 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.04■□□□□ 0.8
SRRM4A7MD48 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM4A7MD48 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.04■□□□□ 0.8
SRRM4A7MD48 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.03■□□□□ 0.8
SRRM4A7MD48 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SRRM4A7MD48 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRRM4A7MD48 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRRM4A7MD48 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRRM4A7MD48 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRRM4A7MD48 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.02■□□□□ 0.8
SRRM4A7MD48 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRRM4A7MD48 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRRM4A7MD48 DUX4L13-201ENST00000554103 1267 ntBASIC20.01■□□□□ 0.79
SRRM4A7MD48 DUX4L15-201ENST00000611059 1267 ntBASIC20.01■□□□□ 0.79
SRRM4A7MD48 DUX4L23-201ENST00000615195 1269 ntBASIC20.01■□□□□ 0.79
SRRM4A7MD48 DUX4L24-201ENST00000617576 1269 ntBASIC20.01■□□□□ 0.79
SRRM4A7MD48 DUX4L22-201ENST00000618238 1269 ntBASIC20.01■□□□□ 0.79
SRRM4A7MD48 DUX4L20-201ENST00000619712 1269 ntBASIC20.01■□□□□ 0.79
SRRM4A7MD48 DUX4L21-201ENST00000622058 1269 ntBASIC20.01■□□□□ 0.79
SRRM4A7MD48 DUX4L10-201ENST00000622460 1267 ntBASIC20.01■□□□□ 0.79
SRRM4A7MD48 DUX4L25-201ENST00000624915 1269 ntBASIC20.01■□□□□ 0.79
SRRM4A7MD48 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SRRM4A7MD48 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.01■□□□□ 0.79
SRRM4A7MD48 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRRM4A7MD48 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRRM4A7MD48 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRRM4A7MD48 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20■□□□□ 0.79
SRRM4A7MD48 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRRM4A7MD48 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRRM4A7MD48 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SRRM4A7MD48 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRRM4A7MD48 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SRRM4A7MD48 DUX4L11-201ENST00000611504 1267 ntBASIC19.99■□□□□ 0.79
SRRM4A7MD48 DUX4L12-201ENST00000614593 1267 ntBASIC19.99■□□□□ 0.79
SRRM4A7MD48 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.99■□□□□ 0.79
SRRM4A7MD48 DUX4L14-201ENST00000621227 1267 ntBASIC19.99■□□□□ 0.79
SRRM4A7MD48 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.99■□□□□ 0.79
SRRM4A7MD48 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRRM4A7MD48 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRRM4A7MD48 ZNRF2P2-203ENST00000454624 420 ntBASIC19.98■□□□□ 0.79
SRRM4A7MD48 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRRM4A7MD48 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRRM4A7MD48 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRRM4A7MD48 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRRM4A7MD48 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.97■□□□□ 0.79
SRRM4A7MD48 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SRRM4A7MD48 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRRM4A7MD48 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.97■□□□□ 0.79
SRRM4A7MD48 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SRRM4A7MD48 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRRM4A7MD48 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.97■□□□□ 0.79
SRRM4A7MD48 AP004609.3-201ENST00000610705 1884 ntBASIC19.96■□□□□ 0.79
SRRM4A7MD48 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRRM4A7MD48 WHAMMP3-201ENST00000611636 1609 ntBASIC19.96■□□□□ 0.79
SRRM4A7MD48 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SRRM4A7MD48 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SRRM4A7MD48 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRRM4A7MD48 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.95■□□□□ 0.78
SRRM4A7MD48 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM4A7MD48 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SRRM4A7MD48 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.95■□□□□ 0.78
SRRM4A7MD48 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.95■□□□□ 0.78
SRRM4A7MD48 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.95■□□□□ 0.78
SRRM4A7MD48 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.95■□□□□ 0.78
SRRM4A7MD48 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM4A7MD48 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM4A7MD48 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SRRM4A7MD48 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM4A7MD48 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.94■□□□□ 0.78
SRRM4A7MD48 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.93■□□□□ 0.78
SRRM4A7MD48 AC091060.1-201ENST00000623524 1766 ntBASIC19.93■□□□□ 0.78
SRRM4A7MD48 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.92■□□□□ 0.78
SRRM4A7MD48 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM4A7MD48 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.92■□□□□ 0.78
SRRM4A7MD48 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SRRM4A7MD48 ABHD17AP4-201ENST00000411545 909 ntBASIC19.91■□□□□ 0.78
SRRM4A7MD48 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 415.9 ms