Protein–RNA interactions for Protein: A4QN01

LINC01553, Putative uncharacterized protein encoded by LINC01553, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553A4QN01 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
LINC01553A4QN01 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
LINC01553A4QN01 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
LINC01553A4QN01 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LINC01553A4QN01 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27■■□□□ 1.91
LINC01553A4QN01 AC093536.1-201ENST00000569153 554 ntBASIC27■■□□□ 1.91
LINC01553A4QN01 AC074183.2-201ENST00000623112 922 ntBASIC27■■□□□ 1.91
LINC01553A4QN01 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27■■□□□ 1.91
LINC01553A4QN01 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
LINC01553A4QN01 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LINC01553A4QN01 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
LINC01553A4QN01 AC009299.2-201ENST00000482477 511 ntBASIC26.99■■□□□ 1.91
LINC01553A4QN01 RAP2CP1-202ENST00000605179 643 ntBASIC26.99■■□□□ 1.91
LINC01553A4QN01 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.99■■□□□ 1.91
LINC01553A4QN01 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LINC01553A4QN01 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
LINC01553A4QN01 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.98■■□□□ 1.91
LINC01553A4QN01 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.98■■□□□ 1.91
LINC01553A4QN01 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LINC01553A4QN01 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
LINC01553A4QN01 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LINC01553A4QN01 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LINC01553A4QN01 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
LINC01553A4QN01 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
LINC01553A4QN01 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.96■■□□□ 1.91
LINC01553A4QN01 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LINC01553A4QN01 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.96■■□□□ 1.91
LINC01553A4QN01 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.96■■□□□ 1.91
LINC01553A4QN01 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LINC01553A4QN01 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
LINC01553A4QN01 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
LINC01553A4QN01 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.96■■□□□ 1.91
LINC01553A4QN01 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
LINC01553A4QN01 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LINC01553A4QN01 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
LINC01553A4QN01 AC019069.1-201ENST00000610008 1333 ntBASIC26.95■■□□□ 1.91
LINC01553A4QN01 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
LINC01553A4QN01 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
LINC01553A4QN01 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LINC01553A4QN01 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LINC01553A4QN01 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LINC01553A4QN01 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.94■■□□□ 1.9
LINC01553A4QN01 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.94■■□□□ 1.9
LINC01553A4QN01 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.94■■□□□ 1.9
LINC01553A4QN01 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.94■■□□□ 1.9
LINC01553A4QN01 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
LINC01553A4QN01 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LINC01553A4QN01 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
LINC01553A4QN01 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LINC01553A4QN01 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LINC01553A4QN01 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.93■■□□□ 1.9
LINC01553A4QN01 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LINC01553A4QN01 AC103834.1-201ENST00000520383 144 ntBASIC26.93■■□□□ 1.9
LINC01553A4QN01 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
LINC01553A4QN01 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
LINC01553A4QN01 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.92■■□□□ 1.9
LINC01553A4QN01 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LINC01553A4QN01 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
LINC01553A4QN01 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.91■■□□□ 1.9
LINC01553A4QN01 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.91■■□□□ 1.9
LINC01553A4QN01 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.91■■□□□ 1.9
LINC01553A4QN01 AC139795.1-202ENST00000500444 432 ntBASIC26.91■■□□□ 1.9
LINC01553A4QN01 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.91■■□□□ 1.9
LINC01553A4QN01 AP004833.2-201ENST00000532228 1454 ntBASIC26.91■■□□□ 1.9
LINC01553A4QN01 AC100797.4-201ENST00000631653 1827 ntBASIC26.9■■□□□ 1.9
LINC01553A4QN01 YBX1P4-201ENST00000392794 808 ntBASIC26.9■■□□□ 1.9
LINC01553A4QN01 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.9■■□□□ 1.9
LINC01553A4QN01 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LINC01553A4QN01 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.9■■□□□ 1.9
LINC01553A4QN01 AC131212.1-201ENST00000613771 668 ntBASIC26.9■■□□□ 1.9
LINC01553A4QN01 MIR6765-201ENST00000614092 87 ntBASIC26.9■■□□□ 1.9
LINC01553A4QN01 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
LINC01553A4QN01 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.89■■□□□ 1.89
LINC01553A4QN01 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.88■■□□□ 1.89
LINC01553A4QN01 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
LINC01553A4QN01 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LINC01553A4QN01 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LINC01553A4QN01 PVT1_1.1-201ENST00000615125 194 ntBASIC26.88■■□□□ 1.89
LINC01553A4QN01 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LINC01553A4QN01 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
LINC01553A4QN01 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
LINC01553A4QN01 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.87■■□□□ 1.89
LINC01553A4QN01 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.87■■□□□ 1.89
LINC01553A4QN01 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LINC01553A4QN01 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
LINC01553A4QN01 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
LINC01553A4QN01 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.85■■□□□ 1.89
LINC01553A4QN01 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.85■■□□□ 1.89
LINC01553A4QN01 GUSBP5-201ENST00000418136 578 ntBASIC26.84■■□□□ 1.89
LINC01553A4QN01 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.84■■□□□ 1.89
LINC01553A4QN01 THA1P-201ENST00000590384 1145 ntBASIC26.84■■□□□ 1.89
LINC01553A4QN01 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LINC01553A4QN01 MIR3960-201ENST00000583311 91 ntBASIC26.83■■□□□ 1.89
LINC01553A4QN01 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
LINC01553A4QN01 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LINC01553A4QN01 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.83■■□□□ 1.89
LINC01553A4QN01 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
LINC01553A4QN01 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
LINC01553A4QN01 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.82■■□□□ 1.88
LINC01553A4QN01 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms