Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV10A0A0B4J240 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV10A0A0B4J240 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV10A0A0B4J240 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV10A0A0B4J240 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV10A0A0B4J240 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV10A0A0B4J240 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV10A0A0B4J240 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV10A0A0B4J240 AL157400.5-201ENST00000507624 621 ntBASIC17.61■□□□□ 0.41
TRAV10A0A0B4J240 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV10A0A0B4J240 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV10A0A0B4J240 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV10A0A0B4J240 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV10A0A0B4J240 U85056.1-201ENST00000616429 682 ntBASIC17.6■□□□□ 0.41
TRAV10A0A0B4J240 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV10A0A0B4J240 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV10A0A0B4J240 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV10A0A0B4J240 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAV10A0A0B4J240 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV10A0A0B4J240 ABCB10P1-201ENST00000614297 2181 ntBASIC17.59■□□□□ 0.41
TRAV10A0A0B4J240 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV10A0A0B4J240 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV10A0A0B4J240 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV10A0A0B4J240 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV10A0A0B4J240 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV10A0A0B4J240 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV10A0A0B4J240 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV10A0A0B4J240 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV10A0A0B4J240 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV10A0A0B4J240 AC007029.1-201ENST00000604183 313 ntBASIC17.57■□□□□ 0.4
TRAV10A0A0B4J240 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAV10A0A0B4J240 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV10A0A0B4J240 SMPD5-203ENST00000639008 1464 ntBASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV10A0A0B4J240 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV10A0A0B4J240 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV10A0A0B4J240 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.55■□□□□ 0.4
TRAV10A0A0B4J240 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV10A0A0B4J240 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV10A0A0B4J240 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV10A0A0B4J240 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV10A0A0B4J240 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV10A0A0B4J240 AC018358.1-201ENST00000631079 1402 ntBASIC17.54■□□□□ 0.4
TRAV10A0A0B4J240 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV10A0A0B4J240 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV10A0A0B4J240 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV10A0A0B4J240 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
TRAV10A0A0B4J240 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV10A0A0B4J240 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV10A0A0B4J240 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV10A0A0B4J240 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV10A0A0B4J240 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV10A0A0B4J240 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.52■□□□□ 0.39
TRAV10A0A0B4J240 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.52■□□□□ 0.39
TRAV10A0A0B4J240 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV10A0A0B4J240 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV10A0A0B4J240 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV10A0A0B4J240 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV10A0A0B4J240 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAV10A0A0B4J240 KRT18P60-201ENST00000312876 1297 ntBASIC17.5■□□□□ 0.39
TRAV10A0A0B4J240 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV10A0A0B4J240 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV10A0A0B4J240 AL033527.3-201ENST00000566366 1196 ntBASIC17.5■□□□□ 0.39
TRAV10A0A0B4J240 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.5■□□□□ 0.39
TRAV10A0A0B4J240 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 TSPY13P-201ENST00000338964 914 ntBASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV10A0A0B4J240 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 AC025884.2-201ENST00000553429 711 ntBASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 AC133552.2-201ENST00000619106 1032 ntBASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV10A0A0B4J240 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV10A0A0B4J240 RP9P-202ENST00000450133 1212 ntBASIC17.47■□□□□ 0.39
TRAV10A0A0B4J240 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.47■□□□□ 0.39
TRAV10A0A0B4J240 MIR3960-201ENST00000583311 91 ntBASIC17.47■□□□□ 0.39
TRAV10A0A0B4J240 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV10A0A0B4J240 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms