Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.63■□□□□ 0.89
IGHV3-43A0A0B4J1X8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGHV3-43A0A0B4J1X8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
IGHV3-43A0A0B4J1X8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
IGHV3-43A0A0B4J1X8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.62■□□□□ 0.89
IGHV3-43A0A0B4J1X8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGHV3-43A0A0B4J1X8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGHV3-43A0A0B4J1X8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IGHV3-43A0A0B4J1X8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IGHV3-43A0A0B4J1X8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IGHV3-43A0A0B4J1X8 LINC01971-201ENST00000617888 1048 ntBASIC20.61■□□□□ 0.89
IGHV3-43A0A0B4J1X8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IGHV3-43A0A0B4J1X8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
IGHV3-43A0A0B4J1X8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.6■□□□□ 0.89
IGHV3-43A0A0B4J1X8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.6■□□□□ 0.89
IGHV3-43A0A0B4J1X8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
IGHV3-43A0A0B4J1X8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.6■□□□□ 0.89
IGHV3-43A0A0B4J1X8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGHV3-43A0A0B4J1X8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.59■□□□□ 0.89
IGHV3-43A0A0B4J1X8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.59■□□□□ 0.89
IGHV3-43A0A0B4J1X8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGHV3-43A0A0B4J1X8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
IGHV3-43A0A0B4J1X8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IGHV3-43A0A0B4J1X8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IGHV3-43A0A0B4J1X8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IGHV3-43A0A0B4J1X8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IGHV3-43A0A0B4J1X8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.57■□□□□ 0.88
IGHV3-43A0A0B4J1X8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IGHV3-43A0A0B4J1X8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IGHV3-43A0A0B4J1X8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
IGHV3-43A0A0B4J1X8 ZNRF2P2-203ENST00000454624 420 ntBASIC20.57■□□□□ 0.88
IGHV3-43A0A0B4J1X8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.57■□□□□ 0.88
IGHV3-43A0A0B4J1X8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.57■□□□□ 0.88
IGHV3-43A0A0B4J1X8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGHV3-43A0A0B4J1X8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.56■□□□□ 0.88
IGHV3-43A0A0B4J1X8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.56■□□□□ 0.88
IGHV3-43A0A0B4J1X8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IGHV3-43A0A0B4J1X8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGHV3-43A0A0B4J1X8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
IGHV3-43A0A0B4J1X8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.55■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L11-201ENST00000611504 1267 ntBASIC20.55■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L12-201ENST00000614593 1267 ntBASIC20.55■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L14-201ENST00000621227 1267 ntBASIC20.55■□□□□ 0.88
IGHV3-43A0A0B4J1X8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IGHV3-43A0A0B4J1X8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.55■□□□□ 0.88
IGHV3-43A0A0B4J1X8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.55■□□□□ 0.88
IGHV3-43A0A0B4J1X8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L13-201ENST00000554103 1267 ntBASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L15-201ENST00000611059 1267 ntBASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L23-201ENST00000615195 1269 ntBASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L24-201ENST00000617576 1269 ntBASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L22-201ENST00000618238 1269 ntBASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L20-201ENST00000619712 1269 ntBASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L21-201ENST00000622058 1269 ntBASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L10-201ENST00000622460 1267 ntBASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 DUX4L25-201ENST00000624915 1269 ntBASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
IGHV3-43A0A0B4J1X8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
IGHV3-43A0A0B4J1X8 AL449106.1-201ENST00000608517 1980 ntBASIC20.53■□□□□ 0.88
IGHV3-43A0A0B4J1X8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.53■□□□□ 0.88
IGHV3-43A0A0B4J1X8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IGHV3-43A0A0B4J1X8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IGHV3-43A0A0B4J1X8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
IGHV3-43A0A0B4J1X8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.51■□□□□ 0.87
IGHV3-43A0A0B4J1X8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IGHV3-43A0A0B4J1X8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IGHV3-43A0A0B4J1X8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.51■□□□□ 0.87
IGHV3-43A0A0B4J1X8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.51■□□□□ 0.87
IGHV3-43A0A0B4J1X8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IGHV3-43A0A0B4J1X8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IGHV3-43A0A0B4J1X8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IGHV3-43A0A0B4J1X8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGHV3-43A0A0B4J1X8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.5■□□□□ 0.87
IGHV3-43A0A0B4J1X8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGHV3-43A0A0B4J1X8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
IGHV3-43A0A0B4J1X8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGHV3-43A0A0B4J1X8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
IGHV3-43A0A0B4J1X8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IGHV3-43A0A0B4J1X8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
IGHV3-43A0A0B4J1X8 ABHD17AP4-201ENST00000411545 909 ntBASIC20.49■□□□□ 0.87
IGHV3-43A0A0B4J1X8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.49■□□□□ 0.87
IGHV3-43A0A0B4J1X8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IGHV3-43A0A0B4J1X8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.48■□□□□ 0.87
IGHV3-43A0A0B4J1X8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGHV3-43A0A0B4J1X8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGHV3-43A0A0B4J1X8 AP004609.3-201ENST00000610705 1884 ntBASIC20.47■□□□□ 0.87
IGHV3-43A0A0B4J1X8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IGHV3-43A0A0B4J1X8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.47■□□□□ 0.87
IGHV3-43A0A0B4J1X8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.47■□□□□ 0.87
IGHV3-43A0A0B4J1X8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
IGHV3-43A0A0B4J1X8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.47■□□□□ 0.87
IGHV3-43A0A0B4J1X8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IGHV3-43A0A0B4J1X8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IGHV3-43A0A0B4J1X8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IGHV3-43A0A0B4J1X8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IGHV3-43A0A0B4J1X8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IGHV3-43A0A0B4J1X8 WHAMMP3-201ENST00000611636 1609 ntBASIC20.45■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms