Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.54■■□□□ 1.2
TRGV5A0A0B4J1U4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.54■■□□□ 1.2
TRGV5A0A0B4J1U4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRGV5A0A0B4J1U4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRGV5A0A0B4J1U4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.53■■□□□ 1.2
TRGV5A0A0B4J1U4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.53■■□□□ 1.2
TRGV5A0A0B4J1U4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRGV5A0A0B4J1U4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRGV5A0A0B4J1U4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.52■■□□□ 1.2
TRGV5A0A0B4J1U4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRGV5A0A0B4J1U4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRGV5A0A0B4J1U4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.51■■□□□ 1.19
TRGV5A0A0B4J1U4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.51■■□□□ 1.19
TRGV5A0A0B4J1U4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.51■■□□□ 1.19
TRGV5A0A0B4J1U4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.51■■□□□ 1.19
TRGV5A0A0B4J1U4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
TRGV5A0A0B4J1U4 AC018358.1-201ENST00000631079 1402 ntBASIC22.5■■□□□ 1.19
TRGV5A0A0B4J1U4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRGV5A0A0B4J1U4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TRGV5A0A0B4J1U4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRGV5A0A0B4J1U4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRGV5A0A0B4J1U4 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.5■■□□□ 1.19
TRGV5A0A0B4J1U4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TRGV5A0A0B4J1U4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRGV5A0A0B4J1U4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRGV5A0A0B4J1U4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRGV5A0A0B4J1U4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRGV5A0A0B4J1U4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRGV5A0A0B4J1U4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRGV5A0A0B4J1U4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.48■■□□□ 1.19
TRGV5A0A0B4J1U4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.48■■□□□ 1.19
TRGV5A0A0B4J1U4 U85056.1-201ENST00000616429 682 ntBASIC22.48■■□□□ 1.19
TRGV5A0A0B4J1U4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TRGV5A0A0B4J1U4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.47■■□□□ 1.19
TRGV5A0A0B4J1U4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRGV5A0A0B4J1U4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRGV5A0A0B4J1U4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.46■■□□□ 1.19
TRGV5A0A0B4J1U4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRGV5A0A0B4J1U4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRGV5A0A0B4J1U4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRGV5A0A0B4J1U4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
TRGV5A0A0B4J1U4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
TRGV5A0A0B4J1U4 AC012354.3-201ENST00000623734 483 ntBASIC22.46■■□□□ 1.19
TRGV5A0A0B4J1U4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
TRGV5A0A0B4J1U4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRGV5A0A0B4J1U4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRGV5A0A0B4J1U4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.45■■□□□ 1.18
TRGV5A0A0B4J1U4 SMPD5-203ENST00000639008 1464 ntBASIC22.45■■□□□ 1.18
TRGV5A0A0B4J1U4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRGV5A0A0B4J1U4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRGV5A0A0B4J1U4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.44■■□□□ 1.18
TRGV5A0A0B4J1U4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRGV5A0A0B4J1U4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRGV5A0A0B4J1U4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.44■■□□□ 1.18
TRGV5A0A0B4J1U4 AC007029.1-201ENST00000604183 313 ntBASIC22.44■■□□□ 1.18
TRGV5A0A0B4J1U4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.43■■□□□ 1.18
TRGV5A0A0B4J1U4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRGV5A0A0B4J1U4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRGV5A0A0B4J1U4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRGV5A0A0B4J1U4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRGV5A0A0B4J1U4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV5A0A0B4J1U4 AC139426.1-201ENST00000568218 2529 ntBASIC22.42■■□□□ 1.18
TRGV5A0A0B4J1U4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV5A0A0B4J1U4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV5A0A0B4J1U4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV5A0A0B4J1U4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV5A0A0B4J1U4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.42■■□□□ 1.18
TRGV5A0A0B4J1U4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.42■■□□□ 1.18
TRGV5A0A0B4J1U4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRGV5A0A0B4J1U4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRGV5A0A0B4J1U4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRGV5A0A0B4J1U4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRGV5A0A0B4J1U4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
TRGV5A0A0B4J1U4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.41■■□□□ 1.18
TRGV5A0A0B4J1U4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV5A0A0B4J1U4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV5A0A0B4J1U4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV5A0A0B4J1U4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRGV5A0A0B4J1U4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.38■■□□□ 1.17
TRGV5A0A0B4J1U4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
TRGV5A0A0B4J1U4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
TRGV5A0A0B4J1U4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRGV5A0A0B4J1U4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.38■■□□□ 1.17
TRGV5A0A0B4J1U4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRGV5A0A0B4J1U4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
TRGV5A0A0B4J1U4 AC025884.2-201ENST00000553429 711 ntBASIC22.37■■□□□ 1.17
TRGV5A0A0B4J1U4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRGV5A0A0B4J1U4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TRGV5A0A0B4J1U4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.37■■□□□ 1.17
TRGV5A0A0B4J1U4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRGV5A0A0B4J1U4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRGV5A0A0B4J1U4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.37■■□□□ 1.17
TRGV5A0A0B4J1U4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.37■■□□□ 1.17
TRGV5A0A0B4J1U4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRGV5A0A0B4J1U4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.36■■□□□ 1.17
TRGV5A0A0B4J1U4 KRT18P60-201ENST00000312876 1297 ntBASIC22.36■■□□□ 1.17
TRGV5A0A0B4J1U4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRGV5A0A0B4J1U4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRGV5A0A0B4J1U4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.36■■□□□ 1.17
TRGV5A0A0B4J1U4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms