Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 AC021231.2-201ENST00000594613 730 ntBASIC17.41■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 AP004833.2-201ENST00000532228 1454 ntBASIC17.38■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 LINC00273-201ENST00000539813 1452 ntBASIC17.37■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.36■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 AC091060.1-201ENST00000623524 1766 ntBASIC17.34■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-3A0A0A6YYJ7 ABHD17AP4-201ENST00000411545 909 ntBASIC17.33■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms