Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)10.49□□□□□ -0.732e-7■□□□□ 10.8
SRSF1Q07955 HDAC1-206ENST00000476391 2409 ntTSL 1 (best)11.18□□□□□ -0.623e-6■□□□□ 10.8
SRSF1Q07955 FUBP1-212ENST00000492405 668 ntTSL 313.03□□□□□ -0.324e-10■□□□□ 10.8
SRSF1Q07955 FUBP1-213ENST00000492724 583 ntTSL 313.03□□□□□ -0.324e-10■□□□□ 10.8
SRSF1Q07955 FUBP1-210ENST00000488814 612 ntTSL 35.29□□□□□ -1.564e-10■□□□□ 10.8
SRSF1Q07955 FUBP1-206ENST00000474632 639 ntTSL 24.74□□□□□ -1.654e-10■□□□□ 10.8
SRSF1Q07955 FUBP1-208ENST00000483894 605 ntTSL 24.44□□□□□ -1.74e-10■□□□□ 10.8
SRSF1Q07955 FUBP1-207ENST00000480673 262 ntTSL 33.2□□□□□ -1.94e-10■□□□□ 10.8
SRSF1Q07955 FUBP1-211ENST00000489495 2156 ntTSL 22.98□□□□□ -1.934e-10■□□□□ 10.8
SRSF1Q07955 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.2■□□□□ 0.182e-8■□□□□ 10.8
SRSF1Q07955 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.04■□□□□ -02e-8■□□□□ 10.8
SRSF1Q07955 RAB17-205ENST00000411462 663 ntTSL 214.27□□□□□ -0.132e-8■□□□□ 10.8
SRSF1Q07955 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.132e-8■□□□□ 10.8
SRSF1Q07955 RAB17-206ENST00000414278 1511 ntTSL 213.65□□□□□ -0.222e-8■□□□□ 10.8
SRSF1Q07955 RAB17-202ENST00000392001 1792 ntTSL 1 (best)13.1□□□□□ -0.312e-8■□□□□ 10.8
SRSF1Q07955 RAB17-210ENST00000477149 3211 ntTSL 1 (best)10.6□□□□□ -0.712e-8■□□□□ 10.8
SRSF1Q07955 ABCA1-204ENST00000494467 807 ntTSL 37.97□□□□□ -1.137e-8■□□□□ 10.8
SRSF1Q07955 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.27e-8■□□□□ 10.8
SRSF1Q07955 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.392e-6■□□□□ 10.8
SRSF1Q07955 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.042e-6■□□□□ 10.8
SRSF1Q07955 YBX3-207ENST00000539204 649 ntTSL 312.79□□□□□ -0.362e-6■□□□□ 10.8
SRSF1Q07955 YBX3-216ENST00000544622 685 ntTSL 310.7□□□□□ -0.72e-6■□□□□ 10.8
SRSF1Q07955 YBX3-213ENST00000542641 669 ntTSL 410.22□□□□□ -0.772e-6■□□□□ 10.8
SRSF1Q07955 YBX3-212ENST00000542002 952 ntTSL 29.06□□□□□ -0.962e-6■□□□□ 10.8
SRSF1Q07955 YBX3-218ENST00000546298 564 ntTSL 48.92□□□□□ -0.982e-6■□□□□ 10.8
SRSF1Q07955 YBX3-208ENST00000540447 6393 ntTSL 27.41□□□□□ -1.222e-6■□□□□ 10.8
SRSF1Q07955 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.284e-8■□□□□ 10.8
SRSF1Q07955 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.254e-8■□□□□ 10.8
SRSF1Q07955 TMEM259-206ENST00000589055 791 ntTSL 315.76■□□□□ 0.114e-8■□□□□ 10.8
SRSF1Q07955 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.67□□□□□ -0.064e-8■□□□□ 10.8
SRSF1Q07955 TMEM259-205ENST00000586704 2538 ntTSL 513.73□□□□□ -0.214e-8■□□□□ 10.8
SRSF1Q07955 SRSF3-203ENST00000477442 1095 ntTSL 512.77□□□□□ -0.374e-11■□□□□ 10.8
SRSF1Q07955 SRSF3-201ENST00000339436 1518 ntTSL 211.64□□□□□ -0.554e-11■□□□□ 10.8
SRSF1Q07955 SRSF3-206ENST00000620242 544 ntTSL 211.6□□□□□ -0.554e-11■□□□□ 10.8
SRSF1Q07955 SRSF3-204ENST00000613941 595 ntTSL 411.35□□□□□ -0.594e-11■□□□□ 10.8
SRSF1Q07955 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.574e-11■□□□□ 10.8
SRSF1Q07955 CBFA2T3-204ENST00000563640 664 ntTSL 215.05■□□□□ -02e-7■□□□□ 10.8
SRSF1Q07955 TARDBP-222ENST00000620505 657 ntTSL 58.6□□□□□ -1.038e-7■□□□□ 10.8
SRSF1Q07955 TARDBP-210ENST00000496840 692 ntTSL 36.98□□□□□ -1.298e-7■□□□□ 10.8
SRSF1Q07955 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.558e-7■□□□□ 10.8
SRSF1Q07955 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.31□□□□□ -1.568e-7■□□□□ 10.8
SRSF1Q07955 AL109811.4-204ENST00000622108 645 ntTSL 55.17□□□□□ -1.588e-7■□□□□ 10.8
SRSF1Q07955 TARDBP-214ENST00000613177 379 ntTSL 34.78□□□□□ -1.648e-7■□□□□ 10.8
SRSF1Q07955 TARDBP-212ENST00000611008 929 ntTSL 54.3□□□□□ -1.728e-7■□□□□ 10.8
SRSF1Q07955 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.94■■□□□ 1.19e-9■□□□□ 10.8
SRSF1Q07955 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.069e-9■□□□□ 10.8
SRSF1Q07955 PLXNB1-211ENST00000470525 835 ntTSL 517.91■□□□□ 0.461e-11■□□□□ 10.8
SRSF1Q07955 PLXNB1-214ENST00000478171 576 ntTSL 316■□□□□ 0.151e-11■□□□□ 10.8
SRSF1Q07955 ZNF276-212ENST00000569901 548 ntTSL 214.01□□□□□ -0.173e-6■□□□□ 10.8
SRSF1Q07955 ATG4B-211ENST00000429899 524 ntTSL 410.92□□□□□ -0.663e-6■□□□□ 10.8
SRSF1Q07955 PLXNB1-218ENST00000485535 3264 ntTSL 29.57□□□□□ -0.881e-11■□□□□ 10.8
SRSF1Q07955 XPO5-212ENST00000612911 911 ntTSL 28.41□□□□□ -1.063e-6■□□□□ 10.8
SRSF1Q07955 XPO5-203ENST00000398835 868 ntTSL 57.72□□□□□ -1.173e-6■□□□□ 10.8
SRSF1Q07955 AHSA2-205ENST00000471542 1971 ntTSL 211.49□□□□□ -0.575e-7■□□□□ 10.8
SRSF1Q07955 SETD5-228ENST00000493918 4861 ntTSL 1 (best)5.48□□□□□ -1.535e-6■□□□□ 10.7
SRSF1Q07955 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.541e-7■□□□□ 10.7
SRSF1Q07955 RABL6-208ENST00000464941 3361 ntTSL 212.69□□□□□ -0.381e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-213ENST00000456693 750 ntTSL 519.61■□□□□ 0.732e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-224ENST00000496396 944 ntTSL 1 (best)18.03■□□□□ 0.482e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-205ENST00000414843 575 ntTSL 418.01■□□□□ 0.472e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-219ENST00000491126 604 ntTSL 418.01■□□□□ 0.472e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-210ENST00000448708 549 ntTSL 517.36■□□□□ 0.372e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-206ENST00000434366 519 ntTSL 517.27■□□□□ 0.362e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-217ENST00000483743 541 ntTSL 516.63■□□□□ 0.252e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-208ENST00000444537 737 ntTSL 516.09■□□□□ 0.172e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-209ENST00000445474 575 ntTSL 415.96■□□□□ 0.152e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-212ENST00000456171 1793 ntTSL 214.87□□□□□ -0.032e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.12e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.752e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.782e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-204ENST00000409184 4636 ntAPPRIS ALT2 TSL 1 (best)7.2□□□□□ -1.262e-7■□□□□ 10.7
SRSF1Q07955 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.272e-7■□□□□ 10.7
SRSF1Q07955 MLXIPL-210ENST00000476404 1921 ntTSL 213.35□□□□□ -0.276e-9■□□□□ 10.7
SRSF1Q07955 NAP1L1-212ENST00000547993 2481 ntTSL 1 (best)5.57□□□□□ -1.525e-11■□□□□ 10.7
SRSF1Q07955 HNRNPM-211ENST00000598603 784 ntTSL 217.41■□□□□ 0.385e-13■□□□□ 10.7
SRSF1Q07955 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.475e-8■□□□□ 10.7
SRSF1Q07955 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.065e-8■□□□□ 10.7
SRSF1Q07955 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.045e-8■□□□□ 10.7
SRSF1Q07955 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.73□□□□□ -0.215e-8■□□□□ 10.7
SRSF1Q07955 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)12.53□□□□□ -0.45e-8■□□□□ 10.7
SRSF1Q07955 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC9.79□□□□□ -0.845e-8■□□□□ 10.7
SRSF1Q07955 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)9.63□□□□□ -0.875e-8■□□□□ 10.7
SRSF1Q07955 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)9.15□□□□□ -0.945e-8■□□□□ 10.7
SRSF1Q07955 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.155e-8■□□□□ 10.7
SRSF1Q07955 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.225e-8■□□□□ 10.7
SRSF1Q07955 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.56■□□□□ 0.562e-8■□□□□ 10.7
SRSF1Q07955 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.33■□□□□ 0.211e-6■□□□□ 10.7
SRSF1Q07955 PAXBP1-204ENST00000443785 2920 ntTSL 1 (best)14.35□□□□□ -0.111e-6■□□□□ 10.7
SRSF1Q07955 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.41e-6■□□□□ 10.7
SRSF1Q07955 TARS-203ENST00000502508 552 ntTSL 512.53□□□□□ -0.47e-8■□□□□ 10.7
SRSF1Q07955 AC069061.4-201ENST00000581294 1347 ntBASIC12.37□□□□□ -0.432e-8■□□□□ 10.7
SRSF1Q07955 SLC6A8-208ENST00000467402 308 ntTSL 511.66□□□□□ -0.549e-9■□□□□ 10.7
SRSF1Q07955 TARS-213ENST00000513066 656 ntTSL 39.94□□□□□ -0.827e-8■□□□□ 10.7
SRSF1Q07955 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.832e-8■□□□□ 10.7
SRSF1Q07955 TARS-207ENST00000505012 608 ntTSL 48.87□□□□□ -0.997e-8■□□□□ 10.7
SRSF1Q07955 TARS-208ENST00000506040 755 ntTSL 58.04□□□□□ -1.122e-8■□□□□ 10.7
SRSF1Q07955 TARS-202ENST00000455217 2523 ntTSL 2 BASIC7.58□□□□□ -1.27e-8■□□□□ 10.7
SRSF1Q07955 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.217e-8■□□□□ 10.7
SRSF1Q07955 TARS-210ENST00000508361 2481 ntTSL 27.46□□□□□ -1.227e-8■□□□□ 10.7
SRSF1Q07955 TARS-212ENST00000509731 2170 ntTSL 1 (best)7.42□□□□□ -1.227e-8■□□□□ 10.7
Retrieved 100 of 14,836 protein–RNA pairs in 338 ms