RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 NISCHQ9Y2I1 1504 aa37.81■■■■□ 3.64
PAXBP1-204ENST00000443785 SHROOM4Q9ULL8 1493 aa33.8■■■■□ 3
PAXBP1-204ENST00000443785 SUPT5HO00267 1087 aaKnown RBP33.27■■■□□ 2.92
PAXBP1-204ENST00000443785 DCAF8L2P0C7V8 631 aa32.92■■■□□ 2.86
PAXBP1-204ENST00000443785 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
PAXBP1-204ENST00000443785 CHIC1Q5VXU3 224 aa31.88■■■□□ 2.69
PAXBP1-204ENST00000443785 MYO15BQ96JP2 1530 aa31.8■■■□□ 2.68
PAXBP1-204ENST00000443785 PCGF6Q9BYE7 350 aa31.65■■■□□ 2.66
PAXBP1-204ENST00000443785 LOC105371045A0A1W2PR82 267 aa31.49■■■□□ 2.63
PAXBP1-204ENST00000443785 CCDC180Q9P1Z9 1646 aa31.36■■■□□ 2.61
PAXBP1-204ENST00000443785 PPARGC1BQ86YN6 1023 aaKnown RBP31.33■■■□□ 2.61
PAXBP1-204ENST00000443785 HRCP23327 699 aa31.27■■■□□ 2.6
PAXBP1-204ENST00000443785 EHMT2Q96KQ7 1210 aa31.22■■■□□ 2.59
PAXBP1-204ENST00000443785 FAM9AQ8IZU1 332 aaPredicted RBP30.97■■■□□ 2.55
PAXBP1-204ENST00000443785 TRIM41Q8WV44 630 aa30.56■■■□□ 2.48
PAXBP1-204ENST00000443785 SCRIBQ14160 1630 aa30.48■■■□□ 2.47
PAXBP1-204ENST00000443785 TRIM26Q12899 539 aaPredicted RBP30.39■■■□□ 2.45
PAXBP1-204ENST00000443785 DCAF1Q9Y4B6 1507 aa30.38■■■□□ 2.45
PAXBP1-204ENST00000443785 RSF1Q96T23 1441 aaPredicted RBP30.3■■■□□ 2.44
PAXBP1-204ENST00000443785 ABCC9O60706 1549 aa30.21■■■□□ 2.43
PAXBP1-204ENST00000443785 TTBK1Q5TCY1 1321 aaPredicted RBP30.15■■■□□ 2.42
PAXBP1-204ENST00000443785 RB1CC1Q8TDY2 1594 aa30.06■■■□□ 2.4
PAXBP1-204ENST00000443785 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
PAXBP1-204ENST00000443785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.73■■■□□ 2.35
PAXBP1-204ENST00000443785 MROH2BQ7Z745 1585 aa29.71■■■□□ 2.35
PAXBP1-204ENST00000443785 WIZO95785 1651 aa29.54■■■□□ 2.32
PAXBP1-204ENST00000443785 ZEB1P37275 1124 aaPredicted RBP29.51■■■□□ 2.31
PAXBP1-204ENST00000443785 CCER1Q8TC90 406 aaPredicted RBP29.49■■■□□ 2.31
PAXBP1-204ENST00000443785 PABPN1Q86U42 306 aaKnown RBP eCLIP29.39■■■□□ 2.3
PAXBP1-204ENST00000443785 RANGAP1P46060 587 aaPredicted RBP29.32■■■□□ 2.28
PAXBP1-204ENST00000443785 UBTFP17480 764 aaKnown RBP29.27■■■□□ 2.28
PAXBP1-204ENST00000443785 SCAF1Q9H7N4 1312 aaKnown RBP29.26■■■□□ 2.27
PAXBP1-204ENST00000443785 ABCC8Q09428 1581 aa29.25■■■□□ 2.27
PAXBP1-204ENST00000443785 NACADO15069 1562 aa29.24■■■□□ 2.27
PAXBP1-204ENST00000443785 CCDC88BA6NC98 1476 aa29.15■■■□□ 2.26
PAXBP1-204ENST00000443785 SOGA1O94964 1423 aa29.1■■■□□ 2.25
PAXBP1-204ENST00000443785 RUSC2Q8N2Y8 1516 aa29■■■□□ 2.23
PAXBP1-204ENST00000443785 HNRNPUL2Q1KMD3 747 aaKnown RBP28.96■■■□□ 2.23
PAXBP1-204ENST00000443785 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
PAXBP1-204ENST00000443785 CSRNP3Q8WYN3 585 aa28.91■■■□□ 2.22
PAXBP1-204ENST00000443785 NEUROD1Q13562 356 aa28.9■■■□□ 2.22
PAXBP1-204ENST00000443785 DIEXFQ68CQ4 756 aaKnown RBP28.9■■■□□ 2.22
PAXBP1-204ENST00000443785 CEP162Q5TB80 1403 aa28.89■■■□□ 2.22
PAXBP1-204ENST00000443785 YTHDC1Q96MU7 727 aaKnown RBP28.84■■■□□ 2.21
PAXBP1-204ENST00000443785 TOP2AP11388 1531 aaKnown RBP28.7■■■□□ 2.18
PAXBP1-204ENST00000443785 SMARCA2P51531 1590 aa28.68■■■□□ 2.18
PAXBP1-204ENST00000443785 EIF4G1Q04637 1599 aaKnown RBP28.68■■■□□ 2.18
PAXBP1-204ENST00000443785 SMARCA4P51532 1647 aa28.68■■■□□ 2.18
PAXBP1-204ENST00000443785 ACIN1Q9UKV3 1341 aaKnown RBP28.67■■■□□ 2.18
PAXBP1-204ENST00000443785 GTF3C3Q9Y5Q9 886 aa28.66■■■□□ 2.18
PAXBP1-204ENST00000443785 TNIKQ9UKE5 1360 aa28.58■■■□□ 2.17
PAXBP1-204ENST00000443785 WRNQ14191 1432 aaPredicted RBP eCLIP28.49■■■□□ 2.15
PAXBP1-204ENST00000443785 APLP2Q06481 763 aa28.49■■■□□ 2.15
PAXBP1-204ENST00000443785 ZNF316A6NFI3 1004 aaPredicted RBP28.42■■■□□ 2.14
PAXBP1-204ENST00000443785 CENPBP07199 599 aaPredicted RBP28.41■■■□□ 2.14
PAXBP1-204ENST00000443785 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
PAXBP1-204ENST00000443785 GOLGA3Q08378 1498 aa28.37■■■□□ 2.13
PAXBP1-204ENST00000443785 MIER1Q8N108 512 aa28.36■■■□□ 2.13
PAXBP1-204ENST00000443785 CLIP1P30622 1438 aa28.32■■■□□ 2.12
PAXBP1-204ENST00000443785 ITGAEP38570 1179 aa28.32■■■□□ 2.12
PAXBP1-204ENST00000443785 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
PAXBP1-204ENST00000443785 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
PAXBP1-204ENST00000443785 EEA1Q15075 1411 aa28.2■■■□□ 2.11
PAXBP1-204ENST00000443785 BICRAQ9NZM4 1560 aa28.19■■■□□ 2.1
PAXBP1-204ENST00000443785 PELP1Q8IZL8 1130 aaKnown RBP28.15■■■□□ 2.1
PAXBP1-204ENST00000443785 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
PAXBP1-204ENST00000443785 KANK4Q5T7N3 995 aaPredicted RBP28.12■■■□□ 2.09
PAXBP1-204ENST00000443785 BAZ1BQ9UIG0 1483 aaKnown RBP28.11■■■□□ 2.09
PAXBP1-204ENST00000443785 ATAD2BQ9ULI0 1458 aa28.09■■■□□ 2.09
PAXBP1-204ENST00000443785 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.08
PAXBP1-204ENST00000443785 ATP1B4Q9UN42 357 aaPredicted RBP27.96■■■□□ 2.07
PAXBP1-204ENST00000443785 P3H3Q8IVL6 736 aa27.88■■■□□ 2.05
PAXBP1-204ENST00000443785 KIF21BO75037 1637 aa27.86■■■□□ 2.05
PAXBP1-204ENST00000443785 DHX57Q6P158 1386 aaKnown RBP27.7■■■□□ 2.03
PAXBP1-204ENST00000443785 PEG3Q9GZU2 1588 aa27.69■■■□□ 2.02
PAXBP1-204ENST00000443785 HIRIP3Q9BW71 556 aaPredicted RBP27.68■■■□□ 2.02
PAXBP1-204ENST00000443785 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
PAXBP1-204ENST00000443785 KCNH8Q96L42 1107 aa27.68■■■□□ 2.02
PAXBP1-204ENST00000443785 FAM50AQ14320 339 aaKnown RBP27.65■■■□□ 2.02
PAXBP1-204ENST00000443785 TOP2BQ02880 1626 aa27.57■■■□□ 2
PAXBP1-204ENST00000443785 SIN3AQ96ST3 1273 aa27.56■■■□□ 2
PAXBP1-204ENST00000443785 CUX1P39880 1505 aa27.54■■■□□ 2
PAXBP1-204ENST00000443785 PRXQ9BXM0 1461 aa27.53■■■□□ 2
PAXBP1-204ENST00000443785 KIF27Q86VH2 1401 aa27.52■■■□□ 2
PAXBP1-204ENST00000443785 BCANQ96GW7 911 aa27.48■■□□□ 1.99
PAXBP1-204ENST00000443785 CCNB3Q8WWL7 1395 aa27.46■■□□□ 1.99
PAXBP1-204ENST00000443785 CUX2O14529 1486 aa27.43■■□□□ 1.98
PAXBP1-204ENST00000443785 DDX10Q13206 875 aaKnown RBP27.43■■□□□ 1.98
PAXBP1-204ENST00000443785 ARHGAP35Q9NRY4 1499 aa27.41■■□□□ 1.98
PAXBP1-204ENST00000443785 RAB3GAP2Q9H2M9 1393 aa27.38■■□□□ 1.97
PAXBP1-204ENST00000443785 SUPT16HQ9Y5B9 1047 aaKnown RBP27.34■■□□□ 1.97
PAXBP1-204ENST00000443785 IGF1RP08069 1367 aa27.33■■□□□ 1.97
PAXBP1-204ENST00000443785 CARMIL1Q5VZK9 1371 aa27.28■■□□□ 1.96
PAXBP1-204ENST00000443785 BIVM-ERCC5R4GMW8 1640 aa27.27■■□□□ 1.96
PAXBP1-204ENST00000443785 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
PAXBP1-204ENST00000443785 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.96
PAXBP1-204ENST00000443785 RRBP1Q9P2E9 1410 aaKnown RBP27.25■■□□□ 1.95
PAXBP1-204ENST00000443785 PHLDB1Q86UU1 1377 aa27.25■■□□□ 1.95
PAXBP1-204ENST00000443785 ARID3CA6NKF2 412 aa27.24■■□□□ 1.95
PAXBP1-204ENST00000443785 CLSPNQ9HAW4 1339 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms