RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
TMEM259-206ENST00000589055 CCDC180Q9P1Z9 1646 aa35.42■■■■□ 3.26
TMEM259-206ENST00000589055 ABCC9O60706 1549 aa35.36■■■■□ 3.25
TMEM259-206ENST00000589055 DNAJC5BQ9UF47 199 aa34■■■■□ 3.03
TMEM259-206ENST00000589055 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
TMEM259-206ENST00000589055 NACADO15069 1562 aa33.38■■■□□ 2.93
TMEM259-206ENST00000589055 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
TMEM259-206ENST00000589055 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
TMEM259-206ENST00000589055 ZCCHC6Q5VYS8 1495 aaKnown RBP32.96■■■□□ 2.87
TMEM259-206ENST00000589055 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
TMEM259-206ENST00000589055 PABPN1Q86U42 306 aaKnown RBP eCLIP32.8■■■□□ 2.84
TMEM259-206ENST00000589055 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
TMEM259-206ENST00000589055 BICRAQ9NZM4 1560 aa32.63■■■□□ 2.81
TMEM259-206ENST00000589055 SCRIBQ14160 1630 aa32.4■■■□□ 2.78
TMEM259-206ENST00000589055 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
TMEM259-206ENST00000589055 DNAJC5Q9H3Z4 198 aa32.08■■■□□ 2.73
TMEM259-206ENST00000589055 CECR2Q9BXF3 1484 aa31.98■■■□□ 2.71
TMEM259-206ENST00000589055 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
TMEM259-206ENST00000589055 EIF4G1Q04637 1599 aaKnown RBP31.78■■■□□ 2.68
TMEM259-206ENST00000589055 CUX2O14529 1486 aa31■■■□□ 2.55
TMEM259-206ENST00000589055 SMARCA4P51532 1647 aa30.89■■■□□ 2.54
TMEM259-206ENST00000589055 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.52
TMEM259-206ENST00000589055 NCAPD3P42695 1498 aa30.81■■■□□ 2.52
TMEM259-206ENST00000589055 BAZ1AQ9NRL2 1556 aaPredicted RBP30.74■■■□□ 2.51
TMEM259-206ENST00000589055 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
TMEM259-206ENST00000589055 ERCC6Q03468 1493 aa30.65■■■□□ 2.5
TMEM259-206ENST00000589055 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
TMEM259-206ENST00000589055 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
TMEM259-206ENST00000589055 BAZ1BQ9UIG0 1483 aaKnown RBP30.54■■■□□ 2.48
TMEM259-206ENST00000589055 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
TMEM259-206ENST00000589055 NESP48681 1621 aa30.34■■■□□ 2.45
TMEM259-206ENST00000589055 WIZO95785 1651 aa30.27■■■□□ 2.44
TMEM259-206ENST00000589055 TRIM41Q8WV44 630 aa30.23■■■□□ 2.43
TMEM259-206ENST00000589055 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
TMEM259-206ENST00000589055 THOC2Q8NI27 1593 aaKnown RBP30.07■■■□□ 2.4
TMEM259-206ENST00000589055 RSF1Q96T23 1441 aaPredicted RBP30.06■■■□□ 2.4
TMEM259-206ENST00000589055 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
TMEM259-206ENST00000589055 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
TMEM259-206ENST00000589055 TOP2AP11388 1531 aaKnown RBP29.87■■■□□ 2.37
TMEM259-206ENST00000589055 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
TMEM259-206ENST00000589055 MRC2Q9UBG0 1479 aa29.65■■■□□ 2.34
TMEM259-206ENST00000589055 CFTRP13569 1480 aa29.64■■■□□ 2.34
TMEM259-206ENST00000589055 FANCD2Q9BXW9 1451 aa29.6■■■□□ 2.33
TMEM259-206ENST00000589055 CEP164Q9UPV0 1460 aa29.6■■■□□ 2.33
TMEM259-206ENST00000589055 WDR62O43379 1518 aa29.57■■■□□ 2.32
TMEM259-206ENST00000589055 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
TMEM259-206ENST00000589055 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
TMEM259-206ENST00000589055 URB2Q14146 1524 aaKnown RBP29.37■■■□□ 2.29
TMEM259-206ENST00000589055 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
TMEM259-206ENST00000589055 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
TMEM259-206ENST00000589055 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
TMEM259-206ENST00000589055 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
TMEM259-206ENST00000589055 TOPBP1Q92547 1522 aa29.1■■■□□ 2.25
TMEM259-206ENST00000589055 SUPT5HO00267 1087 aaKnown RBP29.01■■■□□ 2.23
TMEM259-206ENST00000589055 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.23
TMEM259-206ENST00000589055 ZNF608Q9ULD9 1512 aaPredicted RBP28.98■■■□□ 2.23
TMEM259-206ENST00000589055 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
TMEM259-206ENST00000589055 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
TMEM259-206ENST00000589055 ARHGEF11O15085 1522 aa28.91■■■□□ 2.22
TMEM259-206ENST00000589055 EIF4G3O43432 1585 aaKnown RBP28.83■■■□□ 2.21
TMEM259-206ENST00000589055 POLA1P09884 1462 aaPredicted RBP28.82■■■□□ 2.2
TMEM259-206ENST00000589055 TARBP1Q13395 1621 aaKnown RBP28.82■■■□□ 2.2
TMEM259-206ENST00000589055 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
TMEM259-206ENST00000589055 CUX1P39880 1505 aa28.74■■■□□ 2.19
TMEM259-206ENST00000589055 AQRO60306 1485 aaKnown RBP eCLIP28.73■■■□□ 2.197e-14■■■■□ 21.4
TMEM259-206ENST00000589055 TRHP20396 242 aaPredicted RBP28.7■■■□□ 2.18
TMEM259-206ENST00000589055 AEBP2Q6ZN18 517 aaPredicted RBP28.7■■■□□ 2.18
TMEM259-206ENST00000589055 FGD5Q6ZNL6 1462 aa28.7■■■□□ 2.18
TMEM259-206ENST00000589055 SOGA1O94964 1423 aa28.65■■■□□ 2.18
TMEM259-206ENST00000589055 CYB5RLQ6IPT4 315 aa28.63■■■□□ 2.17
TMEM259-206ENST00000589055 TDRD9Q8NDG6 1382 aaKnown RBP28.6■■■□□ 2.17
TMEM259-206ENST00000589055 CHD1O14646 1710 aa28.55■■■□□ 2.16
TMEM259-206ENST00000589055 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
TMEM259-206ENST00000589055 WDR97A6NE52 1622 aa28.5■■■□□ 2.15
TMEM259-206ENST00000589055 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
TMEM259-206ENST00000589055 FBLN2P98095 1184 aa28.45■■■□□ 2.14
TMEM259-206ENST00000589055 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
TMEM259-206ENST00000589055 GRIN2BQ13224 1484 aa28.37■■■□□ 2.13
TMEM259-206ENST00000589055 ABCA10Q8WWZ4 1543 aa28.35■■■□□ 2.13
TMEM259-206ENST00000589055 PBRM1Q86U86 1689 aa28.35■■■□□ 2.13
TMEM259-206ENST00000589055 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
TMEM259-206ENST00000589055 WRNQ14191 1432 aaPredicted RBP eCLIP28.34■■■□□ 2.133e-7■□□□□ 11.1
TMEM259-206ENST00000589055 TOP2BQ02880 1626 aa28.33■■■□□ 2.13
TMEM259-206ENST00000589055 GAPVD1Q14C86 1478 aa28.33■■■□□ 2.13
TMEM259-206ENST00000589055 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
TMEM259-206ENST00000589055 MAGI1Q96QZ7 1491 aaPredicted RBP28.32■■■□□ 2.12
TMEM259-206ENST00000589055 SYNJ2O15056 1496 aa28.24■■■□□ 2.11
TMEM259-206ENST00000589055 CHMP7Q8WUX9 453 aaPredicted RBP28.24■■■□□ 2.11
TMEM259-206ENST00000589055 CLASP1Q7Z460 1538 aa28.2■■■□□ 2.1
TMEM259-206ENST00000589055 ADAMTS12P58397 1594 aa28.1■■■□□ 2.09
TMEM259-206ENST00000589055 GRIN2AQ12879 1464 aa28.03■■■□□ 2.08
TMEM259-206ENST00000589055 ERICH3Q5RHP9 1530 aa27.98■■■□□ 2.07
TMEM259-206ENST00000589055 CEP170Q5SW79 1584 aa27.96■■■□□ 2.07
TMEM259-206ENST00000589055 FHAD1B1AJZ9 1412 aa27.96■■■□□ 2.07
TMEM259-206ENST00000589055 NUP160Q12769 1436 aa27.91■■■□□ 2.06
TMEM259-206ENST00000589055 ERCC6L2Q5T890 1561 aa27.86■■■□□ 2.05
TMEM259-206ENST00000589055 SHROOM2Q13796 1616 aa27.76■■■□□ 2.03
TMEM259-206ENST00000589055 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
TMEM259-206ENST00000589055 IGF1RP08069 1367 aa27.71■■■□□ 2.03
TMEM259-206ENST00000589055 RUSC2Q8N2Y8 1516 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms