RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 NISCHQ9Y2I1 1504 aa32.83■■■□□ 2.85
SRSF3-203ENST00000477442 ABCC9O60706 1549 aa29.45■■■□□ 2.3
SRSF3-203ENST00000477442 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
SRSF3-203ENST00000477442 RB1CC1Q8TDY2 1594 aa27.95■■■□□ 2.07
SRSF3-203ENST00000477442 NACADO15069 1562 aa27.77■■■□□ 2.04
SRSF3-203ENST00000477442 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
SRSF3-203ENST00000477442 DNAJC5BQ9UF47 199 aa27.62■■■□□ 2.01
SRSF3-203ENST00000477442 PABPN1Q86U42 306 aaKnown RBP eCLIP27.45■■□□□ 1.98
SRSF3-203ENST00000477442 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
SRSF3-203ENST00000477442 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
SRSF3-203ENST00000477442 ZCCHC6Q5VYS8 1495 aaKnown RBP27.23■■□□□ 1.95
SRSF3-203ENST00000477442 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
SRSF3-203ENST00000477442 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
SRSF3-203ENST00000477442 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
SRSF3-203ENST00000477442 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
SRSF3-203ENST00000477442 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
SRSF3-203ENST00000477442 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.83
SRSF3-203ENST00000477442 CECR2Q9BXF3 1484 aa26.48■■□□□ 1.83
SRSF3-203ENST00000477442 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
SRSF3-203ENST00000477442 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
SRSF3-203ENST00000477442 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
SRSF3-203ENST00000477442 SMARCA2P51531 1590 aa25.5■■□□□ 1.67
SRSF3-203ENST00000477442 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
SRSF3-203ENST00000477442 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
SRSF3-203ENST00000477442 ERCC6Q03468 1493 aa25.37■■□□□ 1.65
SRSF3-203ENST00000477442 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
SRSF3-203ENST00000477442 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
SRSF3-203ENST00000477442 NESP48681 1621 aa25.34■■□□□ 1.65
SRSF3-203ENST00000477442 PEG3Q9GZU2 1588 aa25.31■■□□□ 1.64
SRSF3-203ENST00000477442 CUX2O14529 1486 aa25.26■■□□□ 1.63
SRSF3-203ENST00000477442 DNAJC5Q9H3Z4 198 aa25.23■■□□□ 1.63
SRSF3-203ENST00000477442 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
SRSF3-203ENST00000477442 WIZO95785 1651 aa25.04■■□□□ 1.6
SRSF3-203ENST00000477442 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
SRSF3-203ENST00000477442 KIF21AQ7Z4S6 1674 aa24.96■■□□□ 1.59
SRSF3-203ENST00000477442 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
SRSF3-203ENST00000477442 CADPSQ9ULU8 1353 aa24.89■■□□□ 1.57
SRSF3-203ENST00000477442 RSF1Q96T23 1441 aaPredicted RBP24.83■■□□□ 1.57
SRSF3-203ENST00000477442 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
SRSF3-203ENST00000477442 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
SRSF3-203ENST00000477442 WDR62O43379 1518 aa24.66■■□□□ 1.54
SRSF3-203ENST00000477442 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
SRSF3-203ENST00000477442 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
SRSF3-203ENST00000477442 CFTRP13569 1480 aa24.62■■□□□ 1.53
SRSF3-203ENST00000477442 URB2Q14146 1524 aaKnown RBP24.45■■□□□ 1.51
SRSF3-203ENST00000477442 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
SRSF3-203ENST00000477442 PRDM2Q13029 1718 aa24.34■■□□□ 1.49
SRSF3-203ENST00000477442 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
SRSF3-203ENST00000477442 TOPBP1Q92547 1522 aa24.18■■□□□ 1.46
SRSF3-203ENST00000477442 ZNF608Q9ULD9 1512 aaPredicted RBP24.16■■□□□ 1.46
SRSF3-203ENST00000477442 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
SRSF3-203ENST00000477442 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
SRSF3-203ENST00000477442 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
SRSF3-203ENST00000477442 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
SRSF3-203ENST00000477442 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
SRSF3-203ENST00000477442 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.43
SRSF3-203ENST00000477442 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.427e-9■■■■□ 21.1
SRSF3-203ENST00000477442 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
SRSF3-203ENST00000477442 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
SRSF3-203ENST00000477442 RIMBP3CA6NJZ7 1639 aa23.86■■□□□ 1.41
SRSF3-203ENST00000477442 RIMBP3BA6NNM3 1639 aa23.86■■□□□ 1.41
SRSF3-203ENST00000477442 RIMBP3Q9UFD9 1639 aa23.86■■□□□ 1.41
SRSF3-203ENST00000477442 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
SRSF3-203ENST00000477442 SOGA1O94964 1423 aa23.82■■□□□ 1.4
SRSF3-203ENST00000477442 CUX1P39880 1505 aa23.81■■□□□ 1.4
SRSF3-203ENST00000477442 CHD1O14646 1710 aa23.81■■□□□ 1.4
SRSF3-203ENST00000477442 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
SRSF3-203ENST00000477442 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
SRSF3-203ENST00000477442 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
SRSF3-203ENST00000477442 FBLN2P98095 1184 aa23.77■■□□□ 1.4
SRSF3-203ENST00000477442 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
SRSF3-203ENST00000477442 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
SRSF3-203ENST00000477442 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
SRSF3-203ENST00000477442 GRIN2BQ13224 1484 aa23.59■■□□□ 1.37
SRSF3-203ENST00000477442 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
SRSF3-203ENST00000477442 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
SRSF3-203ENST00000477442 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
SRSF3-203ENST00000477442 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
SRSF3-203ENST00000477442 GAPVD1Q14C86 1478 aa23.52■■□□□ 1.36
SRSF3-203ENST00000477442 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
SRSF3-203ENST00000477442 SYNJ2O15056 1496 aa23.5■■□□□ 1.35
SRSF3-203ENST00000477442 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
SRSF3-203ENST00000477442 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
SRSF3-203ENST00000477442 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
SRSF3-203ENST00000477442 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
SRSF3-203ENST00000477442 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
SRSF3-203ENST00000477442 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
SRSF3-203ENST00000477442 TRHP20396 242 aaPredicted RBP23.33■■□□□ 1.33
SRSF3-203ENST00000477442 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
SRSF3-203ENST00000477442 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
SRSF3-203ENST00000477442 CEP170Q5SW79 1584 aa23.25■■□□□ 1.31
SRSF3-203ENST00000477442 ERCC6L2Q5T890 1561 aa23.24■■□□□ 1.31
SRSF3-203ENST00000477442 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
SRSF3-203ENST00000477442 NUP160Q12769 1436 aa23.21■■□□□ 1.31
SRSF3-203ENST00000477442 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
SRSF3-203ENST00000477442 SHROOM2Q13796 1616 aa23.09■■□□□ 1.29
SRSF3-203ENST00000477442 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
SRSF3-203ENST00000477442 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
SRSF3-203ENST00000477442 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
SRSF3-203ENST00000477442 IGF1RP08069 1367 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms