RNA–Protein interactions for RNA: ENST00000477149.5

RAB17-210, Transcript of RAB17, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB17, Length 3,211 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB17-210ENST00000477149 NISCHQ9Y2I1 1504 aa26.53■■□□□ 1.84
RAB17-210ENST00000477149 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
RAB17-210ENST00000477149 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
RAB17-210ENST00000477149 HRCP23327 699 aa22.62■■□□□ 1.21
RAB17-210ENST00000477149 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
RAB17-210ENST00000477149 CCDC180Q9P1Z9 1646 aa22.41■■□□□ 1.18
RAB17-210ENST00000477149 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
RAB17-210ENST00000477149 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
RAB17-210ENST00000477149 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
RAB17-210ENST00000477149 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
RAB17-210ENST00000477149 MYT1Q01538 1121 aa21.72■■□□□ 1.07
RAB17-210ENST00000477149 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
RAB17-210ENST00000477149 ABCC9O60706 1549 aa21.63■■□□□ 1.05
RAB17-210ENST00000477149 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
RAB17-210ENST00000477149 MYO15BQ96JP2 1530 aa21.46■■□□□ 1.03
RAB17-210ENST00000477149 SCRIBQ14160 1630 aa21.38■■□□□ 1.01
RAB17-210ENST00000477149 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
RAB17-210ENST00000477149 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
RAB17-210ENST00000477149 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
RAB17-210ENST00000477149 LOC105371045A0A1W2PR82 267 aa21.12■□□□□ 0.97
RAB17-210ENST00000477149 ACIN1Q9UKV3 1341 aaKnown RBP21.04■□□□□ 0.96
RAB17-210ENST00000477149 GTF3C3Q9Y5Q9 886 aa21.03■□□□□ 0.96
RAB17-210ENST00000477149 NEUROD1Q13562 356 aa21■□□□□ 0.95
RAB17-210ENST00000477149 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
RAB17-210ENST00000477149 NACADO15069 1562 aa20.95■□□□□ 0.94
RAB17-210ENST00000477149 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
RAB17-210ENST00000477149 CENPBP07199 599 aaPredicted RBP20.9■□□□□ 0.94
RAB17-210ENST00000477149 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.922e-11■□□□□ 10.4
RAB17-210ENST00000477149 EHMT2Q96KQ7 1210 aa20.81■□□□□ 0.92
RAB17-210ENST00000477149 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
RAB17-210ENST00000477149 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
RAB17-210ENST00000477149 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
RAB17-210ENST00000477149 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
RAB17-210ENST00000477149 YTHDC1Q96MU7 727 aaKnown RBP20.57■□□□□ 0.88
RAB17-210ENST00000477149 DIEXFQ68CQ4 756 aaKnown RBP20.57■□□□□ 0.88
RAB17-210ENST00000477149 WIZO95785 1651 aa20.55■□□□□ 0.88
RAB17-210ENST00000477149 CCER1Q8TC90 406 aaPredicted RBP20.49■□□□□ 0.87
RAB17-210ENST00000477149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.45■□□□□ 0.86
RAB17-210ENST00000477149 BCL11AQ9H165 835 aa20.37■□□□□ 0.85
RAB17-210ENST00000477149 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
RAB17-210ENST00000477149 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
RAB17-210ENST00000477149 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
RAB17-210ENST00000477149 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
RAB17-210ENST00000477149 BICRAQ9NZM4 1560 aa20.2■□□□□ 0.82
RAB17-210ENST00000477149 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
RAB17-210ENST00000477149 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
RAB17-210ENST00000477149 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
RAB17-210ENST00000477149 ANP32EQ9BTT0 268 aa20.08■□□□□ 0.8
RAB17-210ENST00000477149 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
RAB17-210ENST00000477149 ZNF316A6NFI3 1004 aaPredicted RBP19.99■□□□□ 0.79
RAB17-210ENST00000477149 MIER1Q8N108 512 aa19.96■□□□□ 0.79
RAB17-210ENST00000477149 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
RAB17-210ENST00000477149 SOGA1O94964 1423 aa19.9■□□□□ 0.78
RAB17-210ENST00000477149 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
RAB17-210ENST00000477149 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
RAB17-210ENST00000477149 BAZ1BQ9UIG0 1483 aaKnown RBP19.87■□□□□ 0.77
RAB17-210ENST00000477149 UBTFP17480 764 aaKnown RBP19.85■□□□□ 0.77
RAB17-210ENST00000477149 RUSC2Q8N2Y8 1516 aa19.83■□□□□ 0.76
RAB17-210ENST00000477149 RANGAP1P46060 587 aaPredicted RBP19.82■□□□□ 0.76
RAB17-210ENST00000477149 TSHZ2Q9NRE2 1034 aa19.79■□□□□ 0.76
RAB17-210ENST00000477149 SUPT16HQ9Y5B9 1047 aaKnown RBP19.78■□□□□ 0.76
RAB17-210ENST00000477149 PRKCSHP14314 528 aaPredicted RBP19.77■□□□□ 0.76
RAB17-210ENST00000477149 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
RAB17-210ENST00000477149 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
RAB17-210ENST00000477149 BCANQ96GW7 911 aa19.67■□□□□ 0.74
RAB17-210ENST00000477149 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
RAB17-210ENST00000477149 CEP162Q5TB80 1403 aa19.58■□□□□ 0.73
RAB17-210ENST00000477149 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
RAB17-210ENST00000477149 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
RAB17-210ENST00000477149 TNIKQ9UKE5 1360 aa19.47■□□□□ 0.71
RAB17-210ENST00000477149 HNRNPUL2Q1KMD3 747 aaKnown RBP19.46■□□□□ 0.71
RAB17-210ENST00000477149 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
RAB17-210ENST00000477149 EEA1Q15075 1411 aa19.44■□□□□ 0.7
RAB17-210ENST00000477149 GOLGA3Q08378 1498 aa19.42■□□□□ 0.7
RAB17-210ENST00000477149 RAPGEF2Q9Y4G8 1499 aa19.37■□□□□ 0.69
RAB17-210ENST00000477149 FKBP8Q14318 412 aa19.36■□□□□ 0.69
RAB17-210ENST00000477149 RBM19Q9Y4C8 960 aaKnown RBP19.36■□□□□ 0.69
RAB17-210ENST00000477149 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
RAB17-210ENST00000477149 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.69
RAB17-210ENST00000477149 CLIP1P30622 1438 aa19.31■□□□□ 0.68
RAB17-210ENST00000477149 NEFLP07196 543 aa19.3■□□□□ 0.68
RAB17-210ENST00000477149 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
RAB17-210ENST00000477149 ITGAEP38570 1179 aa19.27■□□□□ 0.68
RAB17-210ENST00000477149 CFTRP13569 1480 aa19.27■□□□□ 0.68
RAB17-210ENST00000477149 CUX1P39880 1505 aa19.27■□□□□ 0.67
RAB17-210ENST00000477149 APLP2Q06481 763 aa19.27■□□□□ 0.67
RAB17-210ENST00000477149 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
RAB17-210ENST00000477149 CC2D2AQ9P2K1 1620 aa19.24■□□□□ 0.67
RAB17-210ENST00000477149 CADPSQ9ULU8 1353 aa19.22■□□□□ 0.67
RAB17-210ENST00000477149 KIF27Q86VH2 1401 aa19.15■□□□□ 0.66
RAB17-210ENST00000477149 KIF21BO75037 1637 aa19.14■□□□□ 0.65
RAB17-210ENST00000477149 NESP48681 1621 aa19.14■□□□□ 0.65
RAB17-210ENST00000477149 ANO8Q9HCE9 1232 aaPredicted RBP19.13■□□□□ 0.65
RAB17-210ENST00000477149 CUX2O14529 1486 aa19.12■□□□□ 0.65
RAB17-210ENST00000477149 MSH5O43196 834 aa19.12■□□□□ 0.65
RAB17-210ENST00000477149 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
RAB17-210ENST00000477149 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
RAB17-210ENST00000477149 P3H3Q8IVL6 736 aa19.09■□□□□ 0.65
RAB17-210ENST00000477149 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.65
RAB17-210ENST00000477149 DEKP35659 375 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms