RNA–Protein interactions for RNA: ENST00000478171.1

PLXNB1-214, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-214ENST00000478171 NISCHQ9Y2I1 1504 aa40.91■■■■■ 4.14
PLXNB1-214ENST00000478171 ABCC9O60706 1549 aa36.87■■■■□ 3.49
PLXNB1-214ENST00000478171 CCDC180Q9P1Z9 1646 aa36.71■■■■□ 3.47
PLXNB1-214ENST00000478171 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
PLXNB1-214ENST00000478171 NACADO15069 1562 aa34.7■■■■□ 3.14
PLXNB1-214ENST00000478171 DNAJC5BQ9UF47 199 aa34.61■■■■□ 3.13
PLXNB1-214ENST00000478171 DCAF8L2P0C7V8 631 aa34.53■■■■□ 3.12
PLXNB1-214ENST00000478171 PABPN1Q86U42 306 aaKnown RBP eCLIP34.29■■■■□ 3.082e-7■□□□□ 11.2
PLXNB1-214ENST00000478171 UNC13AQ9UPW8 1703 aa34.24■■■■□ 3.07
PLXNB1-214ENST00000478171 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
PLXNB1-214ENST00000478171 BICRAQ9NZM4 1560 aa34.02■■■■□ 3.04
PLXNB1-214ENST00000478171 ZCCHC6Q5VYS8 1495 aaKnown RBP33.94■■■■□ 3.02
PLXNB1-214ENST00000478171 DCAF1Q9Y4B6 1507 aa33.72■■■□□ 2.99
PLXNB1-214ENST00000478171 SCRIBQ14160 1630 aa33.57■■■□□ 2.97
PLXNB1-214ENST00000478171 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
PLXNB1-214ENST00000478171 CC2D2AQ9P2K1 1620 aa33.27■■■□□ 2.92
PLXNB1-214ENST00000478171 EIF4G1Q04637 1599 aaKnown RBP33.17■■■□□ 2.9
PLXNB1-214ENST00000478171 CECR2Q9BXF3 1484 aa33.17■■■□□ 2.9
PLXNB1-214ENST00000478171 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
PLXNB1-214ENST00000478171 ATAD2BQ9ULI0 1458 aa31.99■■■□□ 2.71
PLXNB1-214ENST00000478171 SMARCA4P51532 1647 aa31.96■■■□□ 2.71
PLXNB1-214ENST00000478171 SMARCA2P51531 1590 aa31.84■■■□□ 2.69
PLXNB1-214ENST00000478171 HMGXB3Q12766 1538 aa31.83■■■□□ 2.69
PLXNB1-214ENST00000478171 ERCC6Q03468 1493 aa31.78■■■□□ 2.68
PLXNB1-214ENST00000478171 BAZ1AQ9NRL2 1556 aaPredicted RBP31.74■■■□□ 2.67
PLXNB1-214ENST00000478171 DNAJC5Q9H3Z4 198 aa31.7■■■□□ 2.67
PLXNB1-214ENST00000478171 CUX2O14529 1486 aa31.7■■■□□ 2.66
PLXNB1-214ENST00000478171 NESP48681 1621 aa31.67■■■□□ 2.66
PLXNB1-214ENST00000478171 BAZ1BQ9UIG0 1483 aaKnown RBP31.67■■■□□ 2.66
PLXNB1-214ENST00000478171 MROH2BQ7Z745 1585 aa31.59■■■□□ 2.65
PLXNB1-214ENST00000478171 PEG3Q9GZU2 1588 aa31.59■■■□□ 2.65
PLXNB1-214ENST00000478171 THOC2Q8NI27 1593 aaKnown RBP31.35■■■□□ 2.61
PLXNB1-214ENST00000478171 LAMC3Q9Y6N6 1575 aa31.33■■■□□ 2.61
PLXNB1-214ENST00000478171 KIF21AQ7Z4S6 1674 aa31.23■■■□□ 2.59
PLXNB1-214ENST00000478171 WIZO95785 1651 aa31.19■■■□□ 2.58
PLXNB1-214ENST00000478171 PDS5BQ9NTI5 1447 aa31.12■■■□□ 2.57
PLXNB1-214ENST00000478171 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
PLXNB1-214ENST00000478171 MRC2Q9UBG0 1479 aa30.94■■■□□ 2.54
PLXNB1-214ENST00000478171 WDR62O43379 1518 aa30.87■■■□□ 2.53
PLXNB1-214ENST00000478171 RSF1Q96T23 1441 aaPredicted RBP30.86■■■□□ 2.53
PLXNB1-214ENST00000478171 CEP164Q9UPV0 1460 aa30.8■■■□□ 2.52
PLXNB1-214ENST00000478171 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
PLXNB1-214ENST00000478171 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.52
PLXNB1-214ENST00000478171 CFTRP13569 1480 aa30.71■■■□□ 2.51
PLXNB1-214ENST00000478171 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
PLXNB1-214ENST00000478171 CCDC88BA6NC98 1476 aa30.42■■■□□ 2.46
PLXNB1-214ENST00000478171 PRDM2Q13029 1718 aa30.4■■■□□ 2.46
PLXNB1-214ENST00000478171 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
PLXNB1-214ENST00000478171 ZNF608Q9ULD9 1512 aaPredicted RBP30.21■■■□□ 2.43
PLXNB1-214ENST00000478171 TOPBP1Q92547 1522 aa30.19■■■□□ 2.42
PLXNB1-214ENST00000478171 OSCARQ8IYS5 282 aa30.17■■■□□ 2.42
PLXNB1-214ENST00000478171 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
PLXNB1-214ENST00000478171 DNMBPQ6XZF7 1577 aa30.06■■■□□ 2.4
PLXNB1-214ENST00000478171 EIF4G3O43432 1585 aaKnown RBP30.03■■■□□ 2.4
PLXNB1-214ENST00000478171 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
PLXNB1-214ENST00000478171 RIMBP3CA6NJZ7 1639 aa29.93■■■□□ 2.38
PLXNB1-214ENST00000478171 RIMBP3BA6NNM3 1639 aa29.93■■■□□ 2.38
PLXNB1-214ENST00000478171 RIMBP3Q9UFD9 1639 aa29.93■■■□□ 2.38
PLXNB1-214ENST00000478171 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
PLXNB1-214ENST00000478171 AQRO60306 1485 aaKnown RBP eCLIP29.89■■■□□ 2.386e-9■□□□□ 11.2
PLXNB1-214ENST00000478171 POLA1P09884 1462 aaPredicted RBP29.88■■■□□ 2.37
PLXNB1-214ENST00000478171 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
PLXNB1-214ENST00000478171 RAD54L2Q9Y4B4 1467 aa29.8■■■□□ 2.36
PLXNB1-214ENST00000478171 CHD1O14646 1710 aa29.79■■■□□ 2.36
PLXNB1-214ENST00000478171 FGD5Q6ZNL6 1462 aa29.7■■■□□ 2.35
PLXNB1-214ENST00000478171 SOGA1O94964 1423 aa29.69■■■□□ 2.34
PLXNB1-214ENST00000478171 TDRD9Q8NDG6 1382 aaKnown RBP29.68■■■□□ 2.34
PLXNB1-214ENST00000478171 CUX1P39880 1505 aa29.68■■■□□ 2.34
PLXNB1-214ENST00000478171 FBLN2P98095 1184 aa29.66■■■□□ 2.34
PLXNB1-214ENST00000478171 SNAPC4Q5SXM2 1469 aa29.61■■■□□ 2.33
PLXNB1-214ENST00000478171 ARAP1Q96P48 1450 aa29.56■■■□□ 2.32
PLXNB1-214ENST00000478171 CYB5RLQ6IPT4 315 aa29.54■■■□□ 2.32
PLXNB1-214ENST00000478171 WDR97A6NE52 1622 aa29.52■■■□□ 2.32
PLXNB1-214ENST00000478171 SUPT5HO00267 1087 aaKnown RBP29.46■■■□□ 2.31
PLXNB1-214ENST00000478171 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.31
PLXNB1-214ENST00000478171 GRIN2BQ13224 1484 aa29.45■■■□□ 2.31
PLXNB1-214ENST00000478171 MAGI1Q96QZ7 1491 aaPredicted RBP29.44■■■□□ 2.3
PLXNB1-214ENST00000478171 PBRM1Q86U86 1689 aa29.38■■■□□ 2.29
PLXNB1-214ENST00000478171 SYNJ1O43426 1573 aa29.38■■■□□ 2.29
PLXNB1-214ENST00000478171 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
PLXNB1-214ENST00000478171 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
PLXNB1-214ENST00000478171 GAPVD1Q14C86 1478 aa29.35■■■□□ 2.29
PLXNB1-214ENST00000478171 ABCA5Q8WWZ7 1642 aa29.33■■■□□ 2.29
PLXNB1-214ENST00000478171 ABCA10Q8WWZ4 1543 aa29.32■■■□□ 2.28
PLXNB1-214ENST00000478171 TRHP20396 242 aaPredicted RBP29.22■■■□□ 2.27
PLXNB1-214ENST00000478171 BIVM-ERCC5R4GMW8 1640 aa29.15■■■□□ 2.26
PLXNB1-214ENST00000478171 WRNQ14191 1432 aaPredicted RBP eCLIP29.14■■■□□ 2.26
PLXNB1-214ENST00000478171 ADAMTS12P58397 1594 aa29.13■■■□□ 2.25
PLXNB1-214ENST00000478171 TOP2BQ02880 1626 aa29.13■■■□□ 2.25
PLXNB1-214ENST00000478171 GRIN2AQ12879 1464 aa29.1■■■□□ 2.25
PLXNB1-214ENST00000478171 ERCC6L2Q5T890 1561 aa29.06■■■□□ 2.24
PLXNB1-214ENST00000478171 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
PLXNB1-214ENST00000478171 NUP160Q12769 1436 aa29■■■□□ 2.23
PLXNB1-214ENST00000478171 FHAD1B1AJZ9 1412 aa28.96■■■□□ 2.23
PLXNB1-214ENST00000478171 ERICH3Q5RHP9 1530 aa28.92■■■□□ 2.22
PLXNB1-214ENST00000478171 SHROOM2Q13796 1616 aa28.87■■■□□ 2.21
PLXNB1-214ENST00000478171 RUSC2Q8N2Y8 1516 aa28.73■■■□□ 2.19
PLXNB1-214ENST00000478171 PRG4Q92954 1404 aaPredicted RBP28.71■■■□□ 2.19
PLXNB1-214ENST00000478171 JPH4Q96JJ6 628 aa28.62■■■□□ 2.17
PLXNB1-214ENST00000478171 IGF1RP08069 1367 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms