RNA–Protein interactions for RNA: ENST00000310396.9

CPED1-201, Transcript of cadherin like and PC-esterase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPED1, Length 5,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPED1-201ENST00000310396 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.05
CPED1-201ENST00000310396 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
CPED1-201ENST00000310396 ZCCHC6Q5VYS8 1495 aaKnown RBP12.43□□□□□ -0.42
CPED1-201ENST00000310396 SHROOM4Q9ULL8 1493 aa12.3□□□□□ -0.44
CPED1-201ENST00000310396 DCAF1Q9Y4B6 1507 aa12.02□□□□□ -0.48
CPED1-201ENST00000310396 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
CPED1-201ENST00000310396 DCAF8L2P0C7V8 631 aa11.84□□□□□ -0.51
CPED1-201ENST00000310396 MYO15BQ96JP2 1530 aa11.83□□□□□ -0.52
CPED1-201ENST00000310396 ABCC9O60706 1549 aa11.74□□□□□ -0.53
CPED1-201ENST00000310396 SCRIBQ14160 1630 aa11.71□□□□□ -0.53
CPED1-201ENST00000310396 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
CPED1-201ENST00000310396 CHIC1Q5VXU3 224 aa11.64□□□□□ -0.55
CPED1-201ENST00000310396 UNC13AQ9UPW8 1703 aa11.62□□□□□ -0.55
CPED1-201ENST00000310396 RSF1Q96T23 1441 aaPredicted RBP11.62□□□□□ -0.55
CPED1-201ENST00000310396 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
CPED1-201ENST00000310396 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
CPED1-201ENST00000310396 NACADO15069 1562 aa11.51□□□□□ -0.57
CPED1-201ENST00000310396 WIZO95785 1651 aa11.46□□□□□ -0.57
CPED1-201ENST00000310396 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
CPED1-201ENST00000310396 EIF4G1Q04637 1599 aaKnown RBP11.39□□□□□ -0.59
CPED1-201ENST00000310396 LOC105371045A0A1W2PR82 267 aa11.34□□□□□ -0.59
CPED1-201ENST00000310396 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
CPED1-201ENST00000310396 BAZ1AQ9NRL2 1556 aaPredicted RBP11.22□□□□□ -0.61
CPED1-201ENST00000310396 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
CPED1-201ENST00000310396 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
CPED1-201ENST00000310396 CCDC88BA6NC98 1476 aa11.13□□□□□ -0.63
CPED1-201ENST00000310396 ABCC8Q09428 1581 aa11.12□□□□□ -0.63
CPED1-201ENST00000310396 PEG3Q9GZU2 1588 aa11.1□□□□□ -0.63
CPED1-201ENST00000310396 TOP2AP11388 1531 aaKnown RBP11.08□□□□□ -0.64
CPED1-201ENST00000310396 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
CPED1-201ENST00000310396 ATAD2BQ9ULI0 1458 aa10.99□□□□□ -0.65
CPED1-201ENST00000310396 SOGA1O94964 1423 aa10.96□□□□□ -0.65
CPED1-201ENST00000310396 FAM9AQ8IZU1 332 aaPredicted RBP10.94□□□□□ -0.66
CPED1-201ENST00000310396 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
CPED1-201ENST00000310396 TRIM41Q8WV44 630 aa10.92□□□□□ -0.66
CPED1-201ENST00000310396 PCGF6Q9BYE7 350 aa10.9□□□□□ -0.66
CPED1-201ENST00000310396 DNAJC5BQ9UF47 199 aa10.88□□□□□ -0.67
CPED1-201ENST00000310396 PPARGC1BQ86YN6 1023 aaKnown RBP10.86□□□□□ -0.67
CPED1-201ENST00000310396 EHMT2Q96KQ7 1210 aa10.86□□□□□ -0.67
CPED1-201ENST00000310396 HRCP23327 699 aa10.8□□□□□ -0.68
CPED1-201ENST00000310396 NCAPD3P42695 1498 aa10.77□□□□□ -0.69
CPED1-201ENST00000310396 BAZ1BQ9UIG0 1483 aaKnown RBP10.75□□□□□ -0.69
CPED1-201ENST00000310396 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
CPED1-201ENST00000310396 HMGXB3Q12766 1538 aa10.71□□□□□ -0.7
CPED1-201ENST00000310396 CUX1P39880 1505 aa10.7□□□□□ -0.7
CPED1-201ENST00000310396 TOP2BQ02880 1626 aa10.68□□□□□ -0.7
CPED1-201ENST00000310396 BIVM-ERCC5R4GMW8 1640 aa10.67□□□□□ -0.7
CPED1-201ENST00000310396 CFTRP13569 1480 aa10.66□□□□□ -0.7
CPED1-201ENST00000310396 RAPGEF2Q9Y4G8 1499 aa10.66□□□□□ -0.7
CPED1-201ENST00000310396 CEP162Q5TB80 1403 aa10.63□□□□□ -0.71
CPED1-201ENST00000310396 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
CPED1-201ENST00000310396 TRIM26Q12899 539 aaPredicted RBP10.61□□□□□ -0.71
CPED1-201ENST00000310396 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
CPED1-201ENST00000310396 PRXQ9BXM0 1461 aa10.59□□□□□ -0.71
CPED1-201ENST00000310396 NESP48681 1621 aa10.59□□□□□ -0.71
CPED1-201ENST00000310396 TNIKQ9UKE5 1360 aa10.58□□□□□ -0.72
CPED1-201ENST00000310396 KIF21BO75037 1637 aa10.58□□□□□ -0.72
CPED1-201ENST00000310396 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
CPED1-201ENST00000310396 ARAP1Q96P48 1450 aa10.5□□□□□ -0.73
CPED1-201ENST00000310396 CLIP1P30622 1438 aa10.49□□□□□ -0.73
CPED1-201ENST00000310396 EEA1Q15075 1411 aa10.48□□□□□ -0.73
CPED1-201ENST00000310396 GOLGA3Q08378 1498 aa10.47□□□□□ -0.73
CPED1-201ENST00000310396 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
CPED1-201ENST00000310396 IGF1RP08069 1367 aa10.45□□□□□ -0.74
CPED1-201ENST00000310396 CEP164Q9UPV0 1460 aa10.44□□□□□ -0.74
CPED1-201ENST00000310396 FGD5Q6ZNL6 1462 aa10.42□□□□□ -0.74
CPED1-201ENST00000310396 TTBK1Q5TCY1 1321 aaPredicted RBP10.42□□□□□ -0.74
CPED1-201ENST00000310396 RAD54L2Q9Y4B4 1467 aa10.41□□□□□ -0.74
CPED1-201ENST00000310396 ARHGAP35Q9NRY4 1499 aa10.41□□□□□ -0.74
CPED1-201ENST00000310396 URB2Q14146 1524 aaKnown RBP10.41□□□□□ -0.74
CPED1-201ENST00000310396 KANK4Q5T7N3 995 aaPredicted RBP10.41□□□□□ -0.74
CPED1-201ENST00000310396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.4□□□□□ -0.74
CPED1-201ENST00000310396 ERICH3Q5RHP9 1530 aa10.39□□□□□ -0.75
CPED1-201ENST00000310396 WDR97A6NE52 1622 aa10.39□□□□□ -0.75
CPED1-201ENST00000310396 POLA1P09884 1462 aaPredicted RBP10.38□□□□□ -0.75
CPED1-201ENST00000310396 VPS8Q8N3P4 1428 aa10.38□□□□□ -0.75
CPED1-201ENST00000310396 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
CPED1-201ENST00000310396 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
CPED1-201ENST00000310396 TOPBP1Q92547 1522 aa10.36□□□□□ -0.75
CPED1-201ENST00000310396 KIF21AQ7Z4S6 1674 aa10.35□□□□□ -0.75
CPED1-201ENST00000310396 UBTFP17480 764 aaKnown RBP10.35□□□□□ -0.75
CPED1-201ENST00000310396 CUX2O14529 1486 aa10.33□□□□□ -0.76
CPED1-201ENST00000310396 TARBP1Q13395 1621 aaKnown RBP10.3□□□□□ -0.76
CPED1-201ENST00000310396 ABCA10Q8WWZ4 1543 aa10.29□□□□□ -0.76
CPED1-201ENST00000310396 DNMBPQ6XZF7 1577 aa10.29□□□□□ -0.76
CPED1-201ENST00000310396 RANGAP1P46060 587 aaPredicted RBP10.28□□□□□ -0.76
CPED1-201ENST00000310396 ABCA5Q8WWZ7 1642 aa10.28□□□□□ -0.76
CPED1-201ENST00000310396 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
CPED1-201ENST00000310396 LAMC3Q9Y6N6 1575 aa10.24□□□□□ -0.77
CPED1-201ENST00000310396 APLP2Q06481 763 aa10.23□□□□□ -0.77
CPED1-201ENST00000310396 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
CPED1-201ENST00000310396 CARMIL1Q5VZK9 1371 aa10.22□□□□□ -0.77
CPED1-201ENST00000310396 PELP1Q8IZL8 1130 aaKnown RBP10.21□□□□□ -0.78
CPED1-201ENST00000310396 ZNF608Q9ULD9 1512 aaPredicted RBP10.2□□□□□ -0.78
CPED1-201ENST00000310396 MAGI3Q5TCQ9 1506 aa10.19□□□□□ -0.78
CPED1-201ENST00000310396 PCF11O94913 1555 aaKnown RBP10.19□□□□□ -0.78
CPED1-201ENST00000310396 SNAPC4Q5SXM2 1469 aa10.19□□□□□ -0.78
CPED1-201ENST00000310396 PHLDB1Q86UU1 1377 aa10.18□□□□□ -0.78
CPED1-201ENST00000310396 RRBP1Q9P2E9 1410 aaKnown RBP10.18□□□□□ -0.78
CPED1-201ENST00000310396 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms