Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.31□□□□□ -2.22e-10■□□□□ 10.6
SUB1P53999 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC9.42□□□□□ -0.98e-7■□□□□ 10.6
SUB1P53999 PSAP-204ENST00000495196 344 ntTSL 29□□□□□ -0.976e-15■□□□□ 10.5
SUB1P53999 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.683e-13■□□□□ 10.5
SUB1P53999 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.693e-13■□□□□ 10.5
SUB1P53999 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.033e-13■□□□□ 10.5
SUB1P53999 NACA-215ENST00000550920 752 ntTSL 57.85□□□□□ -1.153e-13■□□□□ 10.5
SUB1P53999 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.353e-13■□□□□ 10.5
SUB1P53999 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.42□□□□□ -1.383e-13■□□□□ 10.5
SUB1P53999 NACA-216ENST00000550952 2922 ntTSL 2 BASIC6.35□□□□□ -1.393e-13■□□□□ 10.5
SUB1P53999 NACA-208ENST00000547914 543 ntTSL 55.79□□□□□ -1.483e-13■□□□□ 10.5
SUB1P53999 NACA-210ENST00000548386 644 ntTSL 23.02□□□□□ -1.933e-13■□□□□ 10.5
SUB1P53999 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.81□□□□□ -1.963e-13■□□□□ 10.5
SUB1P53999 HSPA8-209ENST00000526862 504 ntTSL 33.26□□□□□ -1.895e-7■□□□□ 10.5
SUB1P53999 DHX15-205ENST00000508368 415 ntTSL 22.9□□□□□ -1.958e-12■□□□□ 10.5
SUB1P53999 LDHA-222ENST00000543695 554 ntTSL 59.07□□□□□ -0.963e-21■□□□□ 10.5
SUB1P53999 LDHA-215ENST00000537296 1511 ntTSL 28.12□□□□□ -1.113e-21■□□□□ 10.5
SUB1P53999 LDHA-207ENST00000460405 680 ntTSL 37.54□□□□□ -1.23e-21■□□□□ 10.5
SUB1P53999 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.243e-21■□□□□ 10.5
SUB1P53999 LDHA-210ENST00000486690 664 ntTSL 55.34□□□□□ -1.553e-21■□□□□ 10.5
SUB1P53999 LDHA-214ENST00000536528 516 ntTSL 35.2□□□□□ -1.583e-21■□□□□ 10.5
SUB1P53999 LDHA-219ENST00000541097 582 ntTSL 35.08□□□□□ -1.63e-21■□□□□ 10.5
SUB1P53999 C1QBP-203ENST00000573204 911 ntTSL 26.3□□□□□ -1.42e-8■□□□□ 10.5
SUB1P53999 C1QBP-205ENST00000573421 330 ntTSL 21.09□□□□□ -2.232e-8■□□□□ 10.5
SUB1P53999 COPS2-201ENST00000299259 2036 ntTSL 1 (best) BASIC8.4□□□□□ -1.065e-13■□□□□ 10.4
SUB1P53999 COPS2-207ENST00000560240 514 ntTSL 46.2□□□□□ -1.425e-13■□□□□ 10.4
SUB1P53999 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.775e-13■□□□□ 10.4
SUB1P53999 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.12□□□□□ -2.075e-13■□□□□ 10.4
SUB1P53999 EIF4A2-226ENST00000497177 849 ntTSL 54.51□□□□□ -1.693e-7■□□□□ 10.4
SUB1P53999 LTBP4-212ENST00000595118 2446 ntTSL 214.06□□□□□ -0.161e-8■□□□□ 10.4
SUB1P53999 LTBP4-204ENST00000318809 1700 ntTSL 213.86□□□□□ -0.191e-8■□□□□ 10.4
SUB1P53999 LTBP4-229ENST00000601032 2019 ntTSL 1 (best)13.03□□□□□ -0.321e-8■□□□□ 10.4
SUB1P53999 LTBP4-226ENST00000599724 910 ntTSL 511.89□□□□□ -0.511e-8■□□□□ 10.4
SUB1P53999 LTBP4-202ENST00000243562 3140 ntTSL 211.49□□□□□ -0.571e-8■□□□□ 10.4
SUB1P53999 LTBP4-217ENST00000597151 285 ntTSL 211.26□□□□□ -0.611e-8■□□□□ 10.4
SUB1P53999 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.86□□□□□ -0.031e-6■□□□□ 10.4
SUB1P53999 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.39□□□□□ -0.111e-6■□□□□ 10.4
SUB1P53999 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.97□□□□□ -0.331e-6■□□□□ 10.4
SUB1P53999 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.551e-6■□□□□ 10.4
SUB1P53999 PDLIM1-202ENST00000477757 850 ntTSL 214.25□□□□□ -0.132e-7■□□□□ 10.4
SUB1P53999 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.322e-7■□□□□ 10.4
SUB1P53999 PDLIM1-204ENST00000492511 453 ntTSL 25.39□□□□□ -1.552e-7■□□□□ 10.4
SUB1P53999 COX6B1-201ENST00000246554 667 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.948e-21■□□□□ 10.4
SUB1P53999 TPI1-204ENST00000474253 427 ntTSL 1 (best)8.38□□□□□ -1.072e-11■□□□□ 10.4
SUB1P53999 DPP7-204ENST00000470766 478 ntTSL 29.64□□□□□ -0.871e-8■□□□□ 10.4
SUB1P53999 EIF2AK1-209ENST00000490523 905 ntTSL 27.3□□□□□ -1.244e-13■□□□□ 10.4
SUB1P53999 RPL37A-207ENST00000478153 2082 ntTSL 1 (best)17.16■□□□□ 0.342e-20■□□□□ 10.4
SUB1P53999 RPL37A-201ENST00000359681 742 ntTSL 1 (best)13.47□□□□□ -0.252e-20■□□□□ 10.4
SUB1P53999 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC9.27□□□□□ -0.932e-20■□□□□ 10.4
SUB1P53999 RPL37A-202ENST00000420712 385 ntTSL 57.46□□□□□ -1.222e-20■□□□□ 10.4
SUB1P53999 RPL37A-208ENST00000487233 2225 ntTSL 27.09□□□□□ -1.272e-20■□□□□ 10.4
SUB1P53999 RPL37A-209ENST00000490649 1701 ntTSL 1 (best)6.43□□□□□ -1.382e-20■□□□□ 10.4
SUB1P53999 RPS20-203ENST00000519369 824 ntTSL 210.21□□□□□ -0.771e-9■□□□□ 10.4
SUB1P53999 RPS20-202ENST00000518875 671 ntTSL 2 BASIC5.49□□□□□ -1.531e-9■□□□□ 10.4
SUB1P53999 HSPA8-203ENST00000524552 963 ntTSL 1 (best)9.72□□□□□ -0.851e-6■□□□□ 10.4
SUB1P53999 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.392e-8■□□□□ 10.3
SUB1P53999 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.692e-8■□□□□ 10.3
SUB1P53999 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.72e-8■□□□□ 10.3
SUB1P53999 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.952e-8■□□□□ 10.3
SUB1P53999 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.162e-8■□□□□ 10.3
SUB1P53999 TUBA1B-205ENST00000549870 565 ntTSL 48.7□□□□□ -1.021e-12■□□□□ 10.3
SUB1P53999 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.126e-10■□□□□ 10.3
SUB1P53999 SDHA-206ENST00000505555 2230 ntTSL 215.68■□□□□ 0.16e-10■□□□□ 10.3
SUB1P53999 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.146e-10■□□□□ 10.3
SUB1P53999 SDHA-205ENST00000504824 1430 ntTSL 512.94□□□□□ -0.346e-10■□□□□ 10.3
SUB1P53999 MAN2A2-224ENST00000560616 988 ntTSL 512.89□□□□□ -0.356e-10■□□□□ 10.3
SUB1P53999 MAN2A2-229ENST00000561240 460 ntTSL 412.83□□□□□ -0.366e-10■□□□□ 10.3
SUB1P53999 MAN2A2-213ENST00000559374 851 ntTSL 512.43□□□□□ -0.426e-10■□□□□ 10.3
SUB1P53999 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.446e-10■□□□□ 10.3
SUB1P53999 MAN2A2-205ENST00000558171 790 ntTSL 511.93□□□□□ -0.56e-10■□□□□ 10.3
SUB1P53999 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.76e-10■□□□□ 10.3
SUB1P53999 SDHA-210ENST00000509420 580 ntTSL 29.7□□□□□ -0.866e-10■□□□□ 10.3
SUB1P53999 CCT8-207ENST00000481059 879 ntTSL 54.99□□□□□ -1.616e-10■□□□□ 10.3
SUB1P53999 CCT8-202ENST00000431234 968 ntTSL 53.16□□□□□ -1.96e-10■□□□□ 10.3
SUB1P53999 CCT8-208ENST00000484403 808 ntTSL 33.05□□□□□ -1.926e-10■□□□□ 10.3
SUB1P53999 ALDOA-208ENST00000562679 906 ntTSL 510.96□□□□□ -0.651e-30■□□□□ 10.3
SUB1P53999 ALDOA-214ENST00000564688 613 ntTSL 58.89□□□□□ -0.991e-30■□□□□ 10.3
SUB1P53999 ALDOA-218ENST00000566146 365 ntTSL 1 (best)6.78□□□□□ -1.321e-30■□□□□ 10.3
SUB1P53999 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.723e-12■□□□□ 10.3
SUB1P53999 TOMM7-204ENST00000463284 731 ntTSL 29.65□□□□□ -0.863e-12■□□□□ 10.3
SUB1P53999 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.35□□□□□ -1.553e-12■□□□□ 10.3
SUB1P53999 TRIM28-205ENST00000595028 486 ntTSL 211.33□□□□□ -0.69e-9■□□□□ 10.3
SUB1P53999 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.66■■□□□ 1.066e-19■□□□□ 10.2
SUB1P53999 GRK2-207ENST00000529738 500 ntTSL 216.05■□□□□ 0.166e-19■□□□□ 10.2
SUB1P53999 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.16e-19■□□□□ 10.2
SUB1P53999 GRK2-202ENST00000416281 4493 ntTSL 212.36□□□□□ -0.436e-19■□□□□ 10.2
SUB1P53999 GRK2-203ENST00000524899 751 ntTSL 311.91□□□□□ -0.56e-19■□□□□ 10.2
SUB1P53999 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.41□□□□□ -0.582e-13■□□□□ 10.2
SUB1P53999 CANX-207ENST00000503303 345 ntTSL 55.84□□□□□ -1.475e-16■□□□□ 10.2
SUB1P53999 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.89□□□□□ -0.513e-11■□□□□ 10.2
SUB1P53999 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.53□□□□□ -0.563e-11■□□□□ 10.2
SUB1P53999 HK1-205ENST00000436817 1042 ntTSL 510.67□□□□□ -0.73e-11■□□□□ 10.2
SUB1P53999 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC10.5□□□□□ -0.733e-11■□□□□ 10.2
SUB1P53999 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.943e-11■□□□□ 10.2
SUB1P53999 FAM172A-202ENST00000502503 1392 ntTSL 27.32□□□□□ -1.243e-11■□□□□ 10.2
SUB1P53999 HK1-212ENST00000480047 575 ntTSL 1 (best)7.24□□□□□ -1.253e-11■□□□□ 10.2
SUB1P53999 HK1-204ENST00000421088 707 ntTSL 56.51□□□□□ -1.373e-11■□□□□ 10.2
SUB1P53999 HK1-213ENST00000483054 592 ntTSL 35.67□□□□□ -1.53e-11■□□□□ 10.2
SUB1P53999 NPM1P27-201ENST00000502784 830 ntBASIC5.18□□□□□ -1.583e-11■□□□□ 10.2
SUB1P53999 HK1-214ENST00000483077 750 ntTSL 34.7□□□□□ -1.663e-11■□□□□ 10.2
Retrieved 100 of 11,644 protein–RNA pairs in 160.8 ms