RNA–Protein interactions for RNA: ENST00000597151.1

LTBP4-217, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-217ENST00000597151 NISCHQ9Y2I1 1504 aa37.96■■■■□ 3.67
LTBP4-217ENST00000597151 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
LTBP4-217ENST00000597151 ABCC9O60706 1549 aa33.87■■■■□ 3.01
LTBP4-217ENST00000597151 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.75
LTBP4-217ENST00000597151 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
LTBP4-217ENST00000597151 NACADO15069 1562 aa32.07■■■□□ 2.72
LTBP4-217ENST00000597151 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
LTBP4-217ENST00000597151 DNAJC5BQ9UF47 199 aa31.66■■■□□ 2.66
LTBP4-217ENST00000597151 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
LTBP4-217ENST00000597151 ZCCHC6Q5VYS8 1495 aaKnown RBP31.47■■■□□ 2.63
LTBP4-217ENST00000597151 UNC13AQ9UPW8 1703 aa31.46■■■□□ 2.63
LTBP4-217ENST00000597151 DCAF1Q9Y4B6 1507 aa31.32■■■□□ 2.6
LTBP4-217ENST00000597151 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
LTBP4-217ENST00000597151 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
LTBP4-217ENST00000597151 SHROOM4Q9ULL8 1493 aa30.88■■■□□ 2.53
LTBP4-217ENST00000597151 CC2D2AQ9P2K1 1620 aa30.56■■■□□ 2.48
LTBP4-217ENST00000597151 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
LTBP4-217ENST00000597151 CECR2Q9BXF3 1484 aa30.49■■■□□ 2.47
LTBP4-217ENST00000597151 NCAPD3P42695 1498 aa29.63■■■□□ 2.33
LTBP4-217ENST00000597151 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
LTBP4-217ENST00000597151 SMARCA4P51532 1647 aa29.55■■■□□ 2.32
LTBP4-217ENST00000597151 SMARCA2P51531 1590 aa29.48■■■□□ 2.31
LTBP4-217ENST00000597151 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
LTBP4-217ENST00000597151 HMGXB3Q12766 1538 aa29.39■■■□□ 2.3
LTBP4-217ENST00000597151 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
LTBP4-217ENST00000597151 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
LTBP4-217ENST00000597151 PEG3Q9GZU2 1588 aa29.24■■■□□ 2.27
LTBP4-217ENST00000597151 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
LTBP4-217ENST00000597151 NESP48681 1621 aa29.13■■■□□ 2.25
LTBP4-217ENST00000597151 CUX2O14529 1486 aa29.08■■■□□ 2.25
LTBP4-217ENST00000597151 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
LTBP4-217ENST00000597151 LAMC3Q9Y6N6 1575 aa28.91■■■□□ 2.22
LTBP4-217ENST00000597151 WIZO95785 1651 aa28.89■■■□□ 2.22
LTBP4-217ENST00000597151 PDS5BQ9NTI5 1447 aa28.78■■■□□ 2.2
LTBP4-217ENST00000597151 CADPSQ9ULU8 1353 aa28.76■■■□□ 2.2
LTBP4-217ENST00000597151 THOC2Q8NI27 1593 aaKnown RBP28.74■■■□□ 2.19
LTBP4-217ENST00000597151 RSF1Q96T23 1441 aaPredicted RBP28.73■■■□□ 2.19
LTBP4-217ENST00000597151 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.19
LTBP4-217ENST00000597151 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
LTBP4-217ENST00000597151 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
LTBP4-217ENST00000597151 CFTRP13569 1480 aa28.45■■■□□ 2.14
LTBP4-217ENST00000597151 CEP164Q9UPV0 1460 aa28.44■■■□□ 2.14
LTBP4-217ENST00000597151 FANCD2Q9BXW9 1451 aa28.42■■■□□ 2.14
LTBP4-217ENST00000597151 WDR62O43379 1518 aa28.42■■■□□ 2.14
LTBP4-217ENST00000597151 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
LTBP4-217ENST00000597151 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
LTBP4-217ENST00000597151 PRDM2Q13029 1718 aa28.07■■■□□ 2.08
LTBP4-217ENST00000597151 TOPBP1Q92547 1522 aa27.89■■■□□ 2.06
LTBP4-217ENST00000597151 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
LTBP4-217ENST00000597151 OSCARQ8IYS5 282 aa27.85■■■□□ 2.05
LTBP4-217ENST00000597151 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
LTBP4-217ENST00000597151 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
LTBP4-217ENST00000597151 DNMBPQ6XZF7 1577 aa27.79■■■□□ 2.04
LTBP4-217ENST00000597151 TRIM41Q8WV44 630 aa27.79■■■□□ 2.04
LTBP4-217ENST00000597151 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
LTBP4-217ENST00000597151 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
LTBP4-217ENST00000597151 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
LTBP4-217ENST00000597151 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
LTBP4-217ENST00000597151 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.01
LTBP4-217ENST00000597151 RAD54L2Q9Y4B4 1467 aa27.55■■■□□ 2
LTBP4-217ENST00000597151 SOGA1O94964 1423 aa27.54■■■□□ 2
LTBP4-217ENST00000597151 CUX1P39880 1505 aa27.48■■□□□ 1.99
LTBP4-217ENST00000597151 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
LTBP4-217ENST00000597151 TDRD9Q8NDG6 1382 aaKnown RBP27.48■■□□□ 1.99
LTBP4-217ENST00000597151 FBLN2P98095 1184 aa27.45■■□□□ 1.98
LTBP4-217ENST00000597151 RIMBP3CA6NJZ7 1639 aa27.4■■□□□ 1.98
LTBP4-217ENST00000597151 RIMBP3BA6NNM3 1639 aa27.4■■□□□ 1.98
LTBP4-217ENST00000597151 RIMBP3Q9UFD9 1639 aa27.4■■□□□ 1.98
LTBP4-217ENST00000597151 CHD1O14646 1710 aa27.37■■□□□ 1.97
LTBP4-217ENST00000597151 ARHGEF11O15085 1522 aa27.34■■□□□ 1.97
LTBP4-217ENST00000597151 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
LTBP4-217ENST00000597151 SNAPC4Q5SXM2 1469 aa27.31■■□□□ 1.96
LTBP4-217ENST00000597151 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
LTBP4-217ENST00000597151 CHMP7Q8WUX9 453 aaPredicted RBP27.25■■□□□ 1.95
LTBP4-217ENST00000597151 MAGI1Q96QZ7 1491 aaPredicted RBP27.22■■□□□ 1.95
LTBP4-217ENST00000597151 CYB5RLQ6IPT4 315 aa27.22■■□□□ 1.95
LTBP4-217ENST00000597151 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
LTBP4-217ENST00000597151 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
LTBP4-217ENST00000597151 SYNJ2O15056 1496 aa27.13■■□□□ 1.93
LTBP4-217ENST00000597151 WRNQ14191 1432 aaPredicted RBP eCLIP27.12■■□□□ 1.93
LTBP4-217ENST00000597151 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
LTBP4-217ENST00000597151 PBRM1Q86U86 1689 aa27.09■■□□□ 1.93
LTBP4-217ENST00000597151 ARAP1Q96P48 1450 aa27.09■■□□□ 1.93
LTBP4-217ENST00000597151 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
LTBP4-217ENST00000597151 CLASP1Q7Z460 1538 aa27.08■■□□□ 1.93
LTBP4-217ENST00000597151 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
LTBP4-217ENST00000597151 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
LTBP4-217ENST00000597151 GRIN2AQ12879 1464 aa26.89■■□□□ 1.9
LTBP4-217ENST00000597151 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
LTBP4-217ENST00000597151 TRHP20396 242 aaPredicted RBP26.87■■□□□ 1.89
LTBP4-217ENST00000597151 FHAD1B1AJZ9 1412 aa26.84■■□□□ 1.89
LTBP4-217ENST00000597151 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
LTBP4-217ENST00000597151 NUP160Q12769 1436 aa26.8■■□□□ 1.88
LTBP4-217ENST00000597151 CEP170Q5SW79 1584 aa26.78■■□□□ 1.88
LTBP4-217ENST00000597151 ERCC6L2Q5T890 1561 aa26.7■■□□□ 1.86
LTBP4-217ENST00000597151 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
LTBP4-217ENST00000597151 KIF27Q86VH2 1401 aa26.58■■□□□ 1.85
LTBP4-217ENST00000597151 JPH4Q96JJ6 628 aa26.58■■□□□ 1.85
LTBP4-217ENST00000597151 IGF1RP08069 1367 aa26.57■■□□□ 1.84
LTBP4-217ENST00000597151 PRG4Q92954 1404 aaPredicted RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms